Protein

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Genbank accession
YP_009800152.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKEITLTEALATLKVLRAKQDNLVRTGTFVGVSARDKVGSQAKEVASAQFQSEFDRLKAFSAKIQEIGAKLYEANSKTTVVVAGKTYTLAEAIYRKGHTSEEAERIRVLKAALQRAEATAAKAKETAEKRADQQVETLLAGRSKDTSVADLAVEMRTKLIADEKIEVIDPNKLADYILAAEEDLVSFSTEVDVAISLVNATTKITVNI
Physico‐chemical
properties
protein length:209 AA
molecular weight: 22704,62610 Da
isoelectric point:6,65865
aromaticity:0,04306
hydropathy:-0,18469

Domains

Domains [InterPro]
DC_0027
STR
1–209
DC_0027
Coil
Unmapped
107–134
Coil
YP_009800152.1
1 209
Architecture
STR
STR 1-209
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AhSzq-1
[NCBI] 		2138298 Uroviricota > Caudoviricetes > Demerecviridae > Shenzhenvirus AhSzq1 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009800152.1 [NCBI]
Genbank nucleotide accession
NC_047949.1 [NCBI]
CDS location
range 68620 -> 69249
strand +
CDS
ATGTCTAAAGAAATCACCCTGACCGAAGCTCTGGCAACCCTGAAAGTTCTGCGTGCCAAGCAAGACAACCTTGTCCGCACTGGTACTTTCGTTGGAGTATCGGCCCGCGATAAGGTTGGTTCCCAGGCTAAGGAAGTTGCTTCCGCGCAATTCCAGTCTGAGTTTGACCGCCTGAAAGCCTTCTCTGCGAAGATTCAGGAAATCGGAGCCAAGCTCTACGAAGCTAACTCCAAGACCACTGTAGTTGTTGCGGGCAAGACTTACACTCTTGCTGAGGCAATCTACCGCAAGGGCCACACTTCTGAGGAAGCAGAACGTATCCGCGTTTTGAAGGCTGCTCTGCAACGTGCAGAAGCTACCGCTGCTAAGGCTAAGGAAACAGCGGAAAAGCGTGCTGACCAACAAGTGGAAACACTTCTGGCTGGACGCAGCAAAGATACCAGCGTAGCCGACTTGGCCGTAGAAATGCGTACCAAGCTGATTGCGGACGAAAAGATTGAAGTCATCGACCCTAACAAGTTGGCGGACTACATTCTGGCGGCTGAGGAAGATCTTGTATCCTTCTCTACCGAGGTTGATGTGGCAATTTCTCTGGTGAACGCAACCACCAAGATTACTGTCAACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
38912a6d6fe64f4c7f4c887d727c7088ea26e8ef525d652c3932040747558e69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of T5-related Aeromonas hydrophila phages AhSzq-1 and AhSzw-1 and proposal to be two new species Chen,L., Yuan,S. and Ma,Y. 2018-03-19 — GenBank