Protein

View in Explore
Genbank accession
YP_009280761.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALYRTGTAAMDAQGVITGTGTKWREPLSLIRTGATIVFLTTPLKLAVISDIVSDTEMKAIQTDGEPVANGNYVILLNDSLTVDGMAQDVAETLRYYQSKETVIEEAIEFFKNFDLKTLQDLVARAESSAQKTDADRAATEQLKNDTQAIKDAAVSETTQIKDTAIAETQRIKDAAVYETNQIKADTDAIKTQTQQIKDSAVAEIGSIKNEAVNASDAAKESQLAAEQSNVAAGNAKQGAETARDEARQWAQQVNPENLLHKDQNLNDLANKDLAREALKVEAVNSVKGQNPGDYNSFRNPAWTYELRIANNGEWRVARNSDNSTSALSVGAGGTGAENVAQARINFQVNRFNQGDGETFIQSPDTIKYLTVGNDGWGYWNTATQQFVPLGIQQGGTGATSDVGARKNLNTPVGGQAINIPDNSNVLGFMTTYAESGYYSSGELVTYQPPEASGWWMFELHVHRKNASGHVEYGSIVATAMNGNKWGIICNDGSWGGWYRISRSDGSMVLAGGDVPNSLGANSLVIGDSDTGFRQNGDGILQAIADNQVMFAFTKSGNIAYRTIQSLAPEDARFAYVEGVRRGGANCFIGGNVEGGAFTAWRDRAAGMLVELPSDDVAVNVVKVVRWGGDWAFGIDVARYGAGGCETHFNVRGAVYGFNDAGYASAVQWVNTSDIRLKANLKEIESAKEKVKSIKGYTYFKRNNLDEDEYSFYSEEAGVIAQDVQTVLPEAVYKISDSEYLGVSYGGVTALLVNAINEMIDDSDKQNETIQKQQDEINELKNEVAEMKKMIEEMQSMFIHIAK
Physico‐chemical
properties
protein length:803 AA
molecular weight: 87193,58720 Da
isoelectric point:4,73301
aromaticity:0,08095
hydropathy:-0,40249

Domains

Domains [InterPro]
DC_0313
STR
1–803
DC_0313
IPR036388
RBD
662–801
IPR036388
IPR030392
CHP
673–770
IPR030392
IPR030392
CHP
673–733
IPR030392 Coil
YP_009280761.1
1 803
Architecture
STR
STR 1-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phSE-2
[NCBI] 		1837218 Uroviricota > Caudoviricetes > Drexlerviridae > Tlsvirus > Tlsvirus phSE2
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009280761.1 [NCBI]
Genbank nucleotide accession
NC_031026.1 [NCBI]
CDS location
range 27083 -> 29494
strand -
CDS
ATGGCTTTATATCGCACTGGTACGGCTGCAATGGACGCACAAGGCGTTATCACTGGTACTGGCACAAAATGGCGTGAGCCGCTTTCTCTTATTCGCACTGGCGCAACAATCGTTTTTTTAACCACGCCTTTAAAGCTGGCGGTTATCAGCGATATTGTAAGCGACACGGAAATGAAAGCGATCCAGACTGACGGCGAGCCAGTAGCAAACGGAAATTATGTAATCCTGTTGAATGACTCGCTAACTGTCGATGGAATGGCGCAAGATGTAGCGGAAACGCTGAGATATTACCAAAGTAAAGAAACGGTTATTGAGGAAGCAATTGAATTCTTCAAAAACTTTGACCTTAAAACATTACAGGATCTTGTTGCTCGCGCTGAGTCTTCCGCACAAAAAACGGATGCAGATCGCGCCGCAACTGAGCAATTAAAAAACGACACGCAAGCTATTAAGGATGCCGCTGTTTCTGAGACTACGCAAATTAAAGATACTGCGATTGCAGAAACTCAACGGATTAAGGATGCTGCTGTTTATGAAACCAATCAGATAAAGGCGGACACTGACGCAATAAAAACGCAGACGCAACAAATAAAAGATAGCGCCGTTGCTGAAATTGGATCAATTAAAAACGAGGCTGTTAATGCTAGCGATGCAGCAAAGGAATCACAACTTGCCGCTGAACAATCAAACGTTGCAGCCGGAAACGCTAAACAAGGCGCTGAAACTGCGCGTGATGAAGCTCGCCAATGGGCACAACAAGTTAACCCTGAAAACCTTCTGCATAAGGATCAGAATCTTAATGATCTTGCTAATAAAGATTTAGCAAGGGAGGCGCTGAAAGTTGAGGCTGTTAATTCAGTTAAGGGGCAAAATCCAGGTGATTATAACTCATTTCGTAACCCTGCATGGACTTATGAATTACGGATCGCAAACAACGGCGAGTGGCGAGTTGCAAGAAATAGCGATAACAGCACATCAGCTCTTTCTGTTGGTGCTGGCGGCACTGGTGCTGAAAACGTTGCTCAAGCGAGAATTAACTTTCAGGTTAACAGGTTTAATCAGGGTGATGGTGAAACATTTATTCAGTCGCCGGATACAATTAAATACCTAACGGTTGGTAATGATGGCTGGGGTTATTGGAATACTGCAACGCAACAGTTTGTTCCTCTTGGAATTCAACAGGGCGGCACTGGTGCAACAAGTGATGTTGGCGCAAGAAAGAACTTAAATACTCCTGTTGGCGGTCAAGCTATTAACATCCCTGATAATTCAAACGTTCTTGGTTTTATGACAACTTATGCAGAAAGCGGTTATTACTCTAGCGGAGAGCTTGTTACATATCAACCTCCTGAAGCCTCTGGTTGGTGGATGTTTGAATTACATGTACACAGAAAAAATGCAAGCGGTCACGTTGAATATGGAAGCATTGTTGCAACCGCAATGAACGGTAATAAATGGGGTATCATATGCAATGATGGCTCTTGGGGTGGATGGTACAGGATTTCAAGATCTGATGGTTCAATGGTTCTTGCGGGTGGAGATGTTCCAAACAGTCTTGGCGCAAACTCTTTGGTTATTGGTGATTCTGATACTGGATTTAGGCAAAATGGAGATGGCATTCTTCAAGCTATTGCTGATAATCAAGTGATGTTTGCATTTACAAAAAGTGGCAATATTGCATACAGAACTATTCAATCACTTGCTCCAGAAGATGCTAGATTCGCTTATGTTGAAGGAGTTAGACGCGGTGGCGCTAATTGCTTTATAGGTGGAAATGTTGAGGGTGGTGCTTTTACTGCATGGCGTGATCGCGCAGCTGGTATGCTTGTTGAACTTCCAAGCGATGATGTAGCCGTTAACGTTGTTAAGGTTGTAAGGTGGGGTGGTGATTGGGCTTTTGGTATAGATGTTGCCAGATATGGCGCTGGAGGTTGCGAAACTCATTTTAATGTAAGGGGCGCTGTTTATGGGTTTAACGATGCTGGTTATGCGTCTGCTGTGCAATGGGTTAACACTTCCGATATTCGCCTGAAAGCAAACCTAAAAGAGATTGAAAGCGCTAAAGAAAAAGTGAAATCAATAAAAGGTTACACTTATTTTAAGCGCAACAATCTTGATGAAGATGAATATTCTTTCTATTCGGAGGAGGCTGGTGTAATAGCTCAAGACGTGCAAACTGTTTTACCGGAAGCTGTTTACAAGATTTCAGATTCAGAATATTTAGGTGTTAGCTATGGCGGTGTAACTGCTCTTTTGGTTAACGCAATTAATGAAATGATTGATGATTCAGATAAGCAGAATGAAACCATTCAGAAGCAACAAGATGAAATCAATGAGCTAAAAAATGAAGTAGCAGAAATGAAAAAGATGATCGAGGAAATGCAATCAATGTTTATTCATATTGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2555b9bef52a2b221377c2f6aec18cb8d6543cd964102e4bbb57e75990efe96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages with potential to inactivate Salmonella Typhimurium: use of single phage suspensions and phage cocktails Pereira,C., Moreirinha,C., Santos,L., Lewicka,M., Almeida,P., Clemente,C., Cunha,A., Delgadillo,I., Romalde,J.L., Nunes,M.L. and Almeida,A. — — GenBank