Protein

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Genbank accession
QGZ17690.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSEVKVNKITPTADCGTVTLGDSGDTIAIPSGTTVTAPSANVTNSGTVNSTTITNSGTLTNSGTITNTGTISGGTISGTIDGQVNWQTTVKTTAFTATAGEGYFCNTTSAAFTVTLPASPSAGDIVGIKDYANTADTNNITIGRNGSNIQGTANDFIIDTEGLAIVLLYVDSTKGWLSVGQSKASDISEAPLFTVATGGTITTCGDFKIHTFTGPGTFTVTTLGNAPTVPTGGPSNVDYLVVAGGGGTSGPGGGGGYGGGGAGGYRTSFPSPSCNAGSFPVTATAFPITVGAGGSVPGTNGANSIFSTITSAGGGKGGQFGVSGPGGSGGGAGHGWVPGHFAAAGTGNTPPVSPPQGNDGGTTSPVGPCEANRAGGGGGGAAAAGNAGSVPSNGGPGGNGSPNSITGSATTYAGGGGGGTGHSCVNVGTGGSGGGGNGGGGGTGGCAAVAVQAGTANTGGGGGGGAARATGQPPATGTGGSGIVVIRYKFQ
Physico‐chemical
properties
protein length:491 AA
molecular weight: 45643,86290 Da
isoelectric point:5,22512
aromaticity:0,05295
hydropathy:-0,05397

Domains

Domains [InterPro]
DC_0634
STR
74–395
DC_0634
IPR036240
STR
90–213
IPR036240 IPR049304
QGZ17690.1
1 491
Architecture
STR
STR 74-489 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17690.1 [NCBI]
Genbank nucleotide accession
MN698239 [NCBI]
CDS location
range 38987 -> 40462
strand +
CDS
ATGAGTGAAGTTAAAGTTAACAAAATTACACCAACAGCAGATTGTGGCACAGTCACACTCGGAGATAGTGGTGATACAATTGCTATTCCATCAGGAACAACAGTCACAGCACCAAGTGCAAACGTAACAAACTCTGGAACTGTAAACTCAACTACAATCACAAACTCTGGAACACTTACAAATTCTGGAACAATCACAAACACAGGAACAATTTCAGGTGGTACAATATCTGGTACCATTGATGGTCAAGTTAATTGGCAAACAACAGTTAAGACAACAGCATTTACTGCAACAGCAGGTGAAGGATATTTTTGTAATACAACAAGTGCGGCTTTTACAGTAACACTTCCAGCCTCCCCTTCAGCGGGTGACATTGTAGGTATCAAAGATTACGCAAACACAGCTGATACAAACAATATTACAATCGGTAGAAATGGTTCTAACATTCAAGGAACAGCAAATGATTTTATTATTGATACAGAAGGTTTAGCAATAGTTTTATTATATGTAGATTCTACAAAAGGTTGGCTATCAGTAGGTCAATCTAAAGCATCTGATATTTCTGAAGCTCCTTTATTCACAGTTGCAACAGGGGGAACAATTACTACTTGTGGAGATTTTAAAATTCATACTTTTACAGGACCTGGTACATTTACAGTAACCACTTTAGGAAATGCACCAACAGTTCCAACAGGTGGACCAAGTAATGTTGACTATTTAGTGGTCGCAGGTGGGGGAGGAACAAGTGGTCCAGGCGGTGGAGGTGGTTATGGTGGAGGTGGTGCAGGTGGTTATCGTACTTCTTTTCCAAGCCCTTCTTGTAACGCTGGATCTTTTCCAGTTACAGCAACCGCATTTCCAATCACAGTAGGAGCTGGTGGATCAGTGCCTGGAACTAATGGTGCTAATTCAATTTTTTCAACAATTACATCTGCAGGTGGTGGTAAAGGTGGTCAGTTTGGTGTTTCTGGTCCTGGAGGTTCAGGTGGTGGAGCTGGACATGGATGGGTTCCAGGTCATTTTGCTGCTGCAGGTACTGGTAATACACCTCCTGTATCTCCTCCCCAAGGTAATGATGGTGGAACAACTAGTCCTGTAGGACCTTGTGAAGCTAATAGAGCAGGTGGTGGTGGAGGTGGAGCTGCTGCAGCAGGAAATGCTGGATCAGTTCCTTCAAATGGTGGTCCAGGTGGTAATGGAAGTCCAAATTCAATCACTGGTTCAGCTACAACTTACGCAGGAGGTGGCGGAGGAGGAACGGGTCATAGTTGTGTTAATGTCGGAACTGGTGGATCAGGTGGTGGCGGAAACGGTGGCGGTGGTGGTACTGGAGGTTGTGCAGCAGTAGCTGTGCAAGCTGGAACTGCTAACACTGGCGGTGGAGGTGGCGGTGGAGCTGCAAGAGCCACAGGTCAACCCCCTGCAACAGGAACAGGTGGTTCAGGAATCGTAGTCATTAGATATAAGTTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0409044aa973dc7369f9b5c527717e3a86fc42d0f69ea6f3886668965814d561
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank