Protein

View in Explore
Genbank accession
QZE50642.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPRNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGVQVFLAYRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGFNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDGRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSELASASLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGSEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNIITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRVMRKENGKRKAEIAHTTVLIANESEARAAEITQLKAQIDDDITSQITTLNEALATESETRATQIGQLQADFAADIDGVKTTMNAGFTQVNQAIANESDARASSEAALDAKIGQNSAALNQKLDSWANVNGVGSMYTMKLGLRYNGQEYSSGMALQLTARGGSVVSQVLFIADRFAIIRNAASGEYTLPFVVQNDQVFMNNALIQDGSITNAKIGQFIQSTNYVPGSSGWSIDKNGSSEFNNVTVRGSIYAWNGNFGLDGGNGVVINGNGVTVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1157 AA
molecular weight: 127289,92550 Da
isoelectric point:4,73369
aromaticity:0,09248
hydropathy:-0,26966

Domains

Domains [InterPro]
DC_0014
STR
1–1157
DC_0014
IPR053171
Unmapped
3–875
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–714
IPR036116
QZE50642.1
1 1157
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1157
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZE50642.1
1 1157
Domain Start End Length (AA) Confidence
N-terminal 1 504 504 0,8916
Central domain 505 1087 584 0,0520
C-terminal 1088 1157 69 0,5046
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-504
Central
505-1087
C-terminal
1088-1157

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-VAC5
[NCBI] 		2864363 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus VAC5 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZE50642.1 [NCBI]
Genbank nucleotide accession
MZ428223.1 [NCBI]
CDS location
range 44582 -> 48055
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTATTGCTTGCTGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATTCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTAACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGTGTTAGTCGAGTAACGCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGAAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGATCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGTGGTCGTTGTATGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATTATCGTCGATAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGACGGCGTTTTCGTCCGGACGTTCCCAAGCGAAAAGACGATGTACACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAACCAGTGTTCAACCCAGACGCAGCTATGCGATTTGGCCACAACCCGACAAGCATTACAGCGATCGGATGCACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCTACAACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGCCGCGTCATGGAAGTATCTGGCGTGCAGGTGTTCCTTGCCTACCGCTGCGACGCGAAGGCTGGAGACACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAGCGTTTCGGCGGACGGTAAAACCCTAACGCTAAACGTGGGATTTAATTTTGACGTTGCGCCGGACAGTGTATTCCTGATCGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGCAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAATGGGGTAATTACCGATGGCCGACCAACTTCGGTTGTCGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGGATGAGCGTCGAAACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAGGATGGTGGGAACTGGAACAACGTTCCGCGAACGGCGACAACGCAGGTTGATATCGAAGGCATCTATGCTGGCGAGTATCAGGCACGCGTGAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTGAATTGGCTAGTGCATCGCTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCTGACAACGAGATTTTCGGAATTCGCGTTAAGTGGGCCATGCCAGAAGGGTCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACACTGATTCCATACCCGGCGGCTGAATACTGGCATTCAATTTTGCCTGCTGGCTACGTTAACTTCTATAAGGCTCGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCGTCGACTGACGTTAACATCATCACAGATGCGATCCTGGATGAAATCCTGGATAGCGACGCGATGAAAGAACTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGCATCATTCAAAACGCTTTGGCGAATGATGCGGACGTCAGGGTTATGCGCAAGGAGAACGGCAAGCGGAAGGCTGAGATCGCGCATACTACCGTGCTGATTGCGAATGAGTCTGAGGCGCGGGCGGCTGAAATTACGCAGCTTAAAGCGCAGATTGATGACGATATCACATCGCAGATCACGACACTTAACGAAGCCCTGGCGACGGAAAGCGAGACGAGAGCAACGCAGATCGGTCAGTTGCAGGCAGATTTTGCGGCTGATATTGACGGCGTAAAAACAACCATGAACGCTGGTTTTACGCAGGTTAATCAGGCTATTGCAAATGAAAGCGACGCGCGGGCAAGTTCAGAGGCGGCACTAGATGCCAAAATCGGGCAGAACTCCGCAGCGCTAAACCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTCGGTTCCATGTACACGATGAAGTTGGGCTTGAGGTACAACGGCCAGGAGTATAGCTCCGGGATGGCGCTACAGCTTACCGCAAGGGGTGGAAGCGTTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCGGCGTCTGGAGAGTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCTCTTATTCAGGATGGCTCAATCACCAACGCGAAGATCGGCCAATTCATACAGTCTACCAACTACGTTCCTGGTAGCAGCGGATGGTCAATCGACAAGAATGGTTCATCTGAGTTTAACAACGTAACGGTAAGGGGTTCAATCTACGCCTGGAATGGCAACTTCGGCCTTGATGGTGGCAATGGCGTTGTAATTAATGGCAACGGCGTTACCGTTAACTTAGACGGTGGCGGTAGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d637c1557eeb486ee1c0f76f4e826037d2284cc131c2d5fd5ff1f3fbec4b414
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3187
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PemIK (PemK/PemI) type II TA system from Klebsiella pneumoniae clinical strains inhibits lytic phage Bleriot,I.I., Blasco,L.L., Pacios,O.O., Fernandez-Garcia,L.L., Ambroa,A.A., Lopez,M.M., Bardanca-Gonzalez,M.M., Fernandez-Cuenca,F.F., Oteo,J.J., Pascual,A.A., Martinez-Martinez,L.L., Domingo-Calap,P.P., Wood,T.T.K. and Tomas,M.M. 2021 — GenBank