Protein

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Genbank accession
ABU53780.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MKDYGISFIPDINQGSKEPSEPIVSDKLNAQKVNELIDKKLKLFKEELVNKEELKSLIQEILKDEGFQNTNIKISKTPPNYNTQAKVGEIWAVLESKKQLFICTANDNDFTSWVDLLGDGSNDIIPKEKIIITFDNTTTGGQYGGCMSDLRLGFENGFATPNKVQDEYENAKFTMTKDGNGLNRSDFTIDSNPTPTDNQIVGTIKTSGIYQETYHKIAHVFKKYNGGADECCLWSSSGSREVSIELENTPMPNKLFARGNGYYGQTEITNVRVKKSIFIGEQEIQSEDFNVEKLEASSDTYGDYAFLFEISKQDQIVMKKELNLNPKKNKKYKKM
Physico‐chemical
properties
protein length:335 AA
molecular weight: 37868,18010 Da
isoelectric point:5,23427
aromaticity:0,09254
hydropathy:-0,68388

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABU53780.1
1 335
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,9946
Central domain 127 324 199 0,5367
C-terminal 325 335 10 0,9918
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-324
C-terminal
325-335

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CGC-2007
[NCBI] 		464033 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABU53780.1 [NCBI]
Genbank nucleotide accession
EF694688.1 [NCBI]
CDS location
range 7540 -> 8547
strand -
CDS
ATGAAAGATTATGGAATTTCTTTTATTCCAGATATTAATCAAGGCTCAAAAGAGCCAAGTGAACCTATAGTTAGTGATAAGCTTAATGCTCAAAAAGTTAATGAGCTTATAGATAAAAAACTAAAGCTTTTTAAAGAAGAGCTTGTTAATAAAGAGGAGCTTAAAAGTCTCATTCAAGAGATTTTAAAAGATGAGGGTTTTCAAAATACAAACATAAAAATATCAAAAACCCCACCTAACTACAATACACAAGCTAAAGTAGGAGAAATTTGGGCGGTTTTAGAAAGTAAAAAGCAATTATTTATTTGCACTGCTAATGATAATGATTTTACAAGCTGGGTTGATTTACTAGGAGATGGTAGCAATGATATTATCCCTAAAGAAAAAATCATTATCACATTTGATAACACTACCACAGGTGGACAATATGGGGGTTGTATGAGTGATTTAAGACTTGGTTTTGAAAATGGTTTTGCTACTCCAAATAAAGTTCAAGATGAATATGAAAACGCAAAATTCACTATGACTAAAGATGGCAATGGGCTTAATAGGAGTGATTTTACTATAGATTCTAATCCTACTCCTACAGATAATCAAATTGTAGGAACGATTAAAACAAGTGGGATTTATCAAGAAACCTATCACAAAATCGCCCATGTGTTTAAAAAATATAATGGTGGCGCTGATGAGTGTTGCTTATGGTCTAGTTCAGGAAGTAGAGAGGTAAGCATAGAACTTGAAAATACACCAATGCCTAATAAGCTTTTTGCTAGGGGTAATGGATATTATGGTCAAACAGAAATTACCAATGTAAGAGTAAAAAAATCCATTTTTATAGGTGAGCAAGAAATTCAAAGTGAAGATTTTAATGTTGAAAAGTTAGAAGCTAGTTCTGATACTTATGGAGATTATGCCTTTTTATTTGAAATTTCTAAACAAGATCAAATTGTTATGAAAAAAGAGCTTAATTTAAATCCTAAAAAAAACAAAAAATACAAAAAAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
24a6808fbb53a30b0fcc8c039b94ae640f3ffb2170b29dec91c2fd96c973befa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7403
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50