Protein

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Genbank accession
QBQ72904.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGAAGYVGSQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAIQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNEQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAHVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGMVSVVFPDGKIVEIDPPVNGWSSDPILRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNIVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89836,41970 Da
isoelectric point:5,97573
aromaticity:0,11486
hydropathy:-0,35368

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
QBQ72904.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72904.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9917
Central domain 143 341 200 0,0833
C-terminal 342 801 459 0,1765
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Patroon
[NCBI] 		2562180 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72904.1 [NCBI]
Genbank nucleotide accession
MK608335 [NCBI]
CDS location
range 24174 -> 26579
strand +
CDS
ATGGCTCTCATTAGTCAATCAATCAAGAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAACAGGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCCGAGGGCCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCGCTGCTGGGTATGTGGGTTCGCAACCTTACGTACACCTCATCAACCGTGATGAGTTCGAGCAGTATTTCGTTGTGTTCACTGGTGAAGACATTAAGGTGTTCGACCTTGATGGTAAGGAGTACCAAGTACGTGGAGACCGCTCTTATGTTCGCACAGCCAACCCACGGGAAGACCTTCGGATGGTAACGGTGGCAGACTATACCTTTGTGACTAACCGCAAGGTGGTTGTGCAGAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGCGATGCGCTGATTAATGTTCGTGGTGGGCAATATGGACGTAGACTCTCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTATTCAACTACCAGACGGCTCACAACCAGCACACGTCAATGAGGTTGACGGTCAGGCCATCGCTGAGAAGCTGGCTGCTCAGTTGCGGAATAACCTAGGGAACCCAAACAATGAACAAGACCCAAATAAGTGGCGCTTCAACGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGACGGTTACGCAGACCAGCTAATCAACCCTGTAACCCATTACACTCAGTCGTTCCAGAAGCTGCCTATTAACGCGCCAGATGGGTACATCGTGAAGATTGTTGGTGATACCTCAAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTATGGGTAGAAACAATCGGCTGGAACACAAGGACTCACCTTCACTACCACACGATGCCTTGGGCGCTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGGTACTTGAGTGGGGTGCTCGTACTGTGGGTGATGATACAACCAACCCATACCCATCGTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGTAACCGTTTGGGCTTCCTTAGTGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTCAACTTCTTCCCGGCATCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCGGTTAGTCATAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCAGAAGAGTTGCTCCTATGGTCTGACCAAGCGCAGTTCGTTCTGACGGCTTCTGGTATCCTATCGAGTCGCTCCGTAGAGTTGAACCTTACGACTCAGTTCGACGTGCAAGACAGGGCACGACCACACGGTGTGGGGCGTAATGTATACTTTGCGTCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCTAATGGGGTGTTTAGTATCTCAGGCACAACCGCTGAGAACTTCGTAGCTATCCTTACGAGCGGTGCGCCGAACCGGGTGTATATCTATAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCATGGTCTCATTGGGACTTTGGGGACAACGTTACGGTGTTTGCAGCACATGTGATAAACTCAACAATGACTGTATTGATGGGCAATGAACATGCTGTGTGGATGGGACGCTTGCATTTCACGAAGAACTCCATAGACATTCCGGGAGAGCCTTACAGATTATACATCGACGCTAAGAGGAAATACACCATACCTGCCGGGACATACAACGATGATACCTACCAGACGTCCATAAGCCTAGCAACGATTTATGGGATGAACTTCACTAAGGGTATGGTTTCGGTGGTCTTTCCTGATGGGAAGATTGTAGAGATAGACCCGCCAGTCAACGGGTGGAGTAGCGACCCAATATTGAGACTCGATGGGAACCAAGAGGGACAAGTAGTCTACATTGGGTTCAACATCCCGTTCACGTATACGTTCTCGAAGTTCCTCATCAAGAAGACCGCTGAGGACGGCTCGACGGCTACCGAGGATATTGGTCGCTTACAGCTTCGGCGTGCGTGGGTAAACTATGAGGATTCTGGCGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCATCTACACGATGGCTGGCGCTCGTTTGGGTTCTGACAATCTGCGCGTTGGCAGGTCGAACATTGGCACAGGGCAGTACCGATTCCCGGTGGTGGGTAATGCGCAGACGAACATAGTAACTATCGAGTCAGATGCATCAACACCACTGAACATCATTGGGTGCGGCTGGGAGGGGAACTACCTTCGTCGTTCTTCTGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a045a0d18aef884c56542111d7420634571320653baef905cf260db9f90f676d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Klebsiella pneumoniae Podophage Patroon Tran,R., Kongari,R., Lessor,L., Gill,J.J. and Liu,M. 2019 31123017 GenBank