Protein

View in Explore
Genbank accession
XOD33087.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MESQFRQPKQVINTEVNKQSIARNFGIGDNEVCYAKAGQPLSGYKAIYDKASQRAYMLPTGLTGTVTSFSTAGVLTHSGGTVDLGALAVERGEYFDLNQTFTSGATLQRKNETIGLGAKRYRWGGTLPKTVPAGSTIAGTGGVSPTAWIETNAEFALGKAGASLSAWNDVLHLRDFINAGFATTEAAVQSAFDAALTTTSKIVDATGVDVTFGNTLNFVLGEIKVVGGVFRGDRDYKITGTQLEGVQFYNCRLRYWGGDVYIHNCHFDGPPRKGQVATISFQGNETEGTFEIDGCTFRGMYYGILAQGTGEKVNSFIARNLSFYDLMGDAIELNVVQKHYDNGCVIENIAIFNIDADKAGVNTPTFQSNWGIGIGIAGQGPYGYEIDDSQYCKNFVIRNVYAEGVRQVVHVEVGRDFTIENIHADPDNTVSTGSGLATGTVVCYGSKNFVIDGVYGEPKVPSGTNPNVVRLIMLQWGTNPVLDPEGNPTGQGEKSNACFNYAVRNVFTRTGTVWAGVSAGPNTDNNASFENIRCNTFRVFGVATHLNLNNIDCRWFDCVGHPESGDGAFPNNFVRSDKTMLTMVNVTATDEYGQGGQFFSRCRYSKITRSGGNVYAEPWVNFTGQLGPLMVPVGQVYYQATGPHGTDGSYFPSGKEFNTSDVVLVTKNGVTTTYIVTSSGMYAPDNDNFAIRAAAVGTKTIVQQKVPNGESSGSPWLYITQFEPGARITIPGAGPNGTDLKTRVVKPPYQTPPSDPGALITMDIADAIQTAVPAGTRIKATVPLTTRPTLPTT
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85155,21410 Da
isoelectric point:5,70319
aromaticity:0,10088
hydropathy:-0,22522

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–92
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050 DC_0045
DC_1348
ATT
3–354
DC_1348
IPR040775
RBD
89–150
IPR040775
XOD33087.1
1 793
Architecture
ATT
STR
RBD
ATT 1-354 | STR 355-424 | RBD 474-792 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD33087.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,9953
Central domain 184 641 459 0,9924
C-terminal 642 793 151 0,8623
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-641
C-terminal
642-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_Ecl_SABI
[NCBI] 		3391471 No lineage information
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD33087.1 [NCBI]
Genbank nucleotide accession
PQ864023 [NCBI]
CDS location
range 23486 -> 25867
strand +
CDS
ATGGAATCTCAATTCCGTCAGCCCAAACAGGTTATCAATACTGAGGTAAACAAGCAGAGTATTGCTCGTAACTTTGGTATTGGTGACAACGAGGTTTGCTATGCGAAAGCTGGTCAACCTCTGTCGGGCTATAAAGCTATCTACGATAAAGCCAGCCAGCGAGCGTATATGCTCCCTACTGGTTTGACCGGTACTGTTACGTCCTTTTCCACTGCGGGCGTTCTGACGCATTCTGGTGGCACTGTAGACCTGGGTGCTCTGGCAGTAGAACGGGGTGAATACTTCGATCTAAACCAGACGTTTACATCTGGTGCTACGTTGCAGCGTAAGAACGAGACTATTGGCCTCGGAGCTAAACGTTATCGTTGGGGTGGCACACTACCTAAAACCGTACCTGCGGGTTCTACTATTGCAGGTACAGGTGGTGTAAGCCCTACAGCCTGGATTGAAACCAATGCTGAATTCGCACTGGGTAAAGCCGGAGCTTCCCTGTCTGCATGGAACGACGTACTCCATCTGCGTGATTTCATCAACGCTGGTTTTGCCACTACTGAAGCTGCGGTTCAGTCTGCATTTGATGCAGCACTGACTACTACCAGTAAGATTGTAGATGCTACTGGTGTTGATGTAACTTTCGGTAATACCCTCAACTTTGTACTCGGTGAGATTAAAGTCGTTGGTGGCGTATTCCGTGGTGACCGCGACTATAAGATAACCGGTACTCAGCTTGAAGGTGTGCAGTTCTATAACTGCCGTCTGCGTTATTGGGGTGGTGATGTGTATATTCACAACTGCCACTTCGATGGGCCACCTCGTAAAGGTCAGGTTGCCACCATCTCCTTCCAGGGTAACGAGACTGAAGGTACGTTTGAGATCGATGGCTGTACGTTCCGTGGTATGTACTACGGCATTCTGGCTCAGGGTACTGGTGAGAAGGTTAACTCCTTCATCGCACGTAACCTGTCGTTCTATGATCTGATGGGTGATGCCATCGAACTGAACGTTGTACAGAAACACTATGACAACGGTTGTGTGATCGAGAACATTGCCATCTTCAACATCGATGCTGATAAAGCTGGCGTTAACACTCCAACCTTCCAGTCCAACTGGGGTATCGGTATCGGTATTGCAGGTCAGGGGCCATATGGCTATGAGATCGATGACAGCCAATACTGTAAGAACTTCGTTATCCGTAACGTCTATGCCGAAGGTGTTCGTCAGGTAGTCCACGTCGAAGTAGGCCGTGACTTCACCATCGAGAACATCCACGCAGACCCGGATAATACCGTGTCTACTGGTTCTGGTTTGGCTACTGGTACTGTAGTTTGCTACGGTTCAAAGAACTTCGTCATTGATGGCGTTTACGGTGAGCCTAAAGTACCATCCGGCACTAACCCTAACGTGGTTCGTCTGATCATGCTTCAGTGGGGTACTAACCCTGTACTGGATCCAGAAGGTAACCCTACCGGGCAAGGTGAGAAGTCCAACGCCTGTTTCAACTATGCAGTGCGTAATGTCTTCACTCGTACTGGTACTGTATGGGCTGGTGTATCTGCCGGGCCGAATACGGATAACAACGCATCGTTTGAAAACATTCGTTGTAATACTTTCCGTGTGTTCGGTGTGGCTACTCACCTGAACCTGAACAACATTGACTGTCGCTGGTTTGACTGCGTAGGTCACCCTGAATCTGGTGACGGTGCATTCCCAAATAACTTTGTACGCAGCGATAAAACGATGCTGACAATGGTTAACGTGACTGCTACCGATGAGTATGGTCAAGGCGGTCAGTTCTTCAGCCGTTGCCGTTACTCTAAGATCACCCGATCTGGTGGTAACGTCTACGCTGAGCCGTGGGTAAACTTCACTGGGCAACTTGGCCCACTGATGGTTCCAGTTGGTCAGGTTTACTACCAGGCTACCGGGCCACATGGTACTGACGGTTCCTACTTCCCTTCCGGGAAGGAGTTCAACACGTCAGACGTGGTACTGGTTACCAAGAACGGCGTGACCACAACGTATATCGTTACGTCCTCTGGTATGTATGCACCGGATAACGATAACTTTGCTATCCGTGCAGCAGCCGTTGGTACTAAGACCATCGTTCAGCAGAAAGTGCCGAATGGTGAATCATCTGGTTCCCCGTGGTTGTACATCACTCAGTTTGAACCGGGTGCTCGTATTACGATCCCTGGTGCCGGGCCGAATGGTACTGACCTTAAAACCAGAGTGGTTAAGCCCCCGTATCAGACTCCACCGTCTGATCCTGGTGCGCTTATCACTATGGATATTGCTGACGCTATCCAGACTGCTGTTCCTGCTGGCACACGTATTAAGGCGACTGTTCCATTAACTACTCGCCCAACTCTGCCAACAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ebadf26413e6f9bed81150f0427b0af43d622d01cb1dd19aa3b82c3c6366203c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of bacteriophage against Enterobacter cloacae Moturi,A. 2024 — GenBank