Protein

View in Explore
Genbank accession
XPK41676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MAAGTLSVTNNSKAVVGAGTTFTAFNAGDFLTLVVGQVPYTVAIASVESDTALTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMIADENNWRAIFGDAEEITVTLPNGQVMQGMSWGYLSQLMKQIDPVEMRNLQQQAAASEAAAQGYRNEAEGFKTETAGIRDATDAIRTQTDQIKSDTQAIKDQTDQIKSDTQAIKDQTNQIKTDTGVIRDEANTAKTDAQSARDAALGYRNEAEQFKNEIDPSKLLAKANNLSDVADPAAARDHLGIGPDDTLTLGNLVTTGNISTTGGISAGRNTWDGSNWGSQGLLASLAILSPDGNSAPGLYVRKSNGDSGYAGEWLYYENSISWATNARIAGFQFRSPKGAMGYSQLWSEAVVRADDFTAQNGTENYKSLIAGAAVTQDIGFAGGVSFGIMTTGINNWPRAQISIGTADRDAAGNMASQMHIRFNEYGQISYVGPLGAGSFQQVPASDRNLKHDIADDASSTAYDNIKALRFRTFVYNNDEQERQRRGIIAQEVEEIDPLYVKHRVYNNHELNGPLVHQLELDTTPLLLDTMRALQDTIKQVEELKAEIAALKQAEELKK
Physico‐chemical
properties
protein length:598 AA
molecular weight: 64514,88790 Da
isoelectric point:4,78552
aromaticity:0,06856
hydropathy:-0,38311

Domains

Domains [InterPro]
DC_0162
STR
1–598
DC_0162
Coil
Unmapped
142–162
Coil Coil IPR030392 Coil
IPR030392
CHP
485–587
IPR030392
XPK41676.1
1 598
Architecture
STR
STR 1-598
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JohannBuxtorf_Bas84
[NCBI] 		3398419 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41676.1 [NCBI]
Genbank nucleotide accession
PQ850611.1 [NCBI]
CDS location
range 21836 -> 23632
strand +
CDS
ATGGCAGCGGGTACTCTATCCGTAACGAATAACAGCAAGGCGGTTGTAGGGGCCGGCACAACGTTTACCGCGTTTAACGCTGGCGACTTCTTAACGCTGGTGGTAGGACAAGTCCCCTACACCGTAGCTATCGCGTCCGTTGAAAGCGACACCGCTCTTACGCTGGTGCTGCCGTTCGACGGCCCGACGGCAACCGGCCTCGCGTGGGATGGCGTTAAGCGCGATACCATGTCACTGGCGACGATGGGCGTAACCGTCCAGGCACAGAAAGCATTGCGCTTGATGATCGCAGATGAAAACAACTGGCGTGCAATCTTCGGCGACGCTGAAGAAATCACCGTGACGTTACCTAACGGGCAGGTTATGCAGGGAATGTCATGGGGCTATCTGTCGCAGTTGATGAAACAGATCGACCCCGTTGAGATGCGCAACCTGCAACAACAAGCCGCCGCATCTGAAGCAGCAGCGCAGGGATACCGGAACGAGGCCGAAGGCTTCAAGACCGAGACGGCTGGGATTCGCGATGCCACCGATGCCATCAGGACGCAAACCGATCAGATTAAATCTGATACGCAGGCCATAAAAGACCAGACCGATCAGATTAAATCTGATACGCAGGCCATAAAAGACCAGACCAACCAGATTAAGACGGATACCGGCGTTATTCGCGACGAAGCCAATACCGCGAAGACGGACGCGCAATCCGCCCGCGATGCTGCGCTGGGATACCGGAACGAGGCCGAACAGTTCAAAAATGAGATCGACCCGTCGAAACTTCTGGCAAAGGCCAACAACCTTAGCGACGTTGCCGACCCCGCGGCAGCGCGCGACCACTTAGGCATCGGGCCTGACGACACCCTTACATTAGGGAACCTGGTAACAACAGGCAACATATCCACGACAGGCGGCATATCCGCGGGCCGCAACACGTGGGATGGGTCTAACTGGGGGAGCCAGGGACTTCTCGCCTCATTAGCGATCCTATCCCCGGACGGAAACTCAGCCCCAGGCTTATACGTGCGAAAATCCAACGGCGACAGCGGATATGCGGGGGAATGGTTGTATTACGAGAACAGTATCAGTTGGGCTACTAACGCGCGTATTGCGGGCTTTCAGTTCCGGTCCCCTAAAGGCGCGATGGGGTATAGCCAGCTATGGTCAGAGGCTGTGGTGCGTGCGGACGACTTCACGGCACAGAATGGCACGGAAAACTATAAGTCGTTAATCGCAGGGGCCGCTGTGACGCAAGACATAGGATTCGCGGGCGGTGTCTCGTTCGGGATAATGACAACTGGCATAAACAACTGGCCCCGGGCGCAGATCTCGATCGGCACAGCAGACCGTGACGCCGCTGGGAATATGGCTTCGCAGATGCACATCCGCTTTAATGAATATGGGCAGATTTCATACGTAGGGCCACTGGGGGCGGGGTCGTTCCAGCAAGTACCTGCGTCGGATCGCAACCTGAAGCATGACATTGCCGATGACGCAAGCAGCACCGCCTACGACAATATCAAGGCTTTGCGGTTCCGCACGTTCGTATACAACAACGATGAACAGGAACGGCAGCGTCGCGGTATTATTGCGCAGGAAGTGGAAGAAATCGACCCGCTGTATGTGAAGCACCGCGTGTATAACAATCACGAATTAAATGGGCCGCTGGTGCACCAGCTTGAACTGGATACGACGCCGCTGTTACTCGACACTATGCGAGCGTTGCAGGATACGATTAAGCAGGTGGAGGAGTTGAAGGCGGAGATCGCGGCGTTGAAGCAGGCGGAAGAGTTGAAGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ce2c8be611ed4b990d0ca38cb0eed77212e1604be5f809a99a1066769e8ba7dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank