Protein

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Genbank accession
QLF88225.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATVNLGSIKFKWKGTYAGGTAYTIDDVVSYNGSSYICIQASTGNLPTNATYFEQMSQAGTDGTDLTSTLTTQGDIVYRDGSGLQRLGAGTSGQLLQSGGSGANVSWTDAPAGITSANIWRMTTPFTGSANPVSSNWAEAQYISSNRMTQSSGVFTFPSTGFWKISTGWSWYRNDDDRQCTVNIQTTEDNSSYLTKGSFDAFFQITQSNNTHTSAYGNIIFDVTNTTTHKVRIKIDTFTSLTNNYGESDKNRTYVEFTRLGDT
Physico‐chemical
properties
protein length:263 AA
molecular weight: 28597,81390 Da
isoelectric point:5,10110
aromaticity:0,11787
hydropathy:-0,47681

Domains

Domains [InterPro]
DC_0393
STR
1–259
DC_0393
G3DSA:2.10.10.20
ATT
16–58
G3DSA:2.10.10.20
IPR003610
CBM
17–43
IPR003610
QLF88225.1
1 263
Architecture
STR
ATT
STR
STR 1-15 | ATT 16-58 | STR 59-259 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Gjalp EXVC020P
[NCBI] 		2736228 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88225.1 [NCBI]
Genbank nucleotide accession
MT375524.1 [NCBI]
CDS location
range 20800 -> 21591
strand -
CDS
ATGGCTACAGTAAATCTCGGCTCAATTAAGTTCAAATGGAAGGGAACTTATGCAGGTGGAACAGCTTATACTATAGATGATGTCGTATCGTACAATGGTTCGTCATACATTTGTATACAAGCAAGTACAGGAAACCTTCCAACCAATGCGACTTACTTTGAACAAATGTCTCAAGCAGGTACTGATGGTACTGACTTAACATCAACTTTAACAACACAAGGCGATATAGTTTATCGTGATGGAAGTGGATTACAAAGATTAGGTGCAGGTACAAGTGGTCAATTACTTCAAAGTGGTGGAAGTGGAGCAAATGTTTCATGGACAGATGCACCTGCAGGAATTACTTCAGCAAATATTTGGAGAATGACAACACCATTTACTGGAAGTGCTAACCCAGTAAGTTCAAATTGGGCTGAAGCACAATATATTTCTAGTAATAGAATGACACAAAGTTCTGGAGTGTTTACTTTTCCATCTACAGGATTTTGGAAAATATCAACTGGTTGGTCTTGGTATAGAAATGATGATGACAGGCAATGTACTGTTAATATTCAAACCACAGAAGATAATAGTTCATATTTAACTAAAGGTTCTTTTGATGCTTTCTTTCAAATAACACAATCTAACAACACTCACACTTCAGCATATGGAAATATAATTTTTGATGTAACTAATACAACAACACACAAGGTAAGAATAAAAATTGATACCTTTACTAGTCTCACAAATAATTATGGAGAAAGTGATAAAAATAGAACATATGTTGAATTTACAAGATTAGGAGACACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e884d8aa66025061c44fd8f0e8a9219eb795e08d37d81ec8936247ef87eb535
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9400
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50