Protein

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Genbank accession
XLM52968.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MVKVTFNGVELTQYITVLEGFSLWKGADFDPQITENTILSGSEFNYTRRKHKTISIPFYVEYESSEGYDFLQSALNVKEPKELTFDIYPNRVFYAIPSGDLNFSEYRLSGKGTIKFIVPDGLAHATYTRTFEFEKNDSGIFEAEIINDGSEEVTVDYKIKLKKESGFIAVTSPYGLLQYGKYDEEDGYIDRKNVTLLSNQKGDFANWSDGTTFYENPNKIVTTQMGYDSELGGRLGTMPANFPTSGTAGAFGYGACKEYILETPVEQWYIWARAWFETGFETQNGEWCLAVIDEQNHLLAGMAIEKNNRVQNKAAIRFLLGDGNGGSIVKREFDLTPSLWIPPNPYGNNSRIQGSNMFDLVKEKDRVQFFYNGGYYPFSASQLNGKKAKRIQFFVGNYAGSDSSVRQFVTHHYLNDFTFQELHVPYWKDVPNRYPTGAVIEIDGSAGEIRVNKQIRLDDEILGTNYFKVPPGKTKVQLNISSFGEIESATATIKEVYV
Physico‐chemical
properties
protein length:498 AA
molecular weight: 56370,37580 Da
isoelectric point:5,12093
aromaticity:0,14056
hydropathy:-0,43896

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–124
G3DSA:2.40.30.200
DC_0420
STR
1–498
DC_0420
IPR006520
Unmapped
5–124
IPR006520
IPR008841
STR
40–118
IPR008841
XLM52968.1
1 498
Architecture
ATT
STR
ATT 1-124 | STR 125-498
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLM52968.1
1 498
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,8882
Central domain 183 381 200 0,2076
C-terminal 382 498 116 0,5933
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-381
C-terminal
382-498

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage vB_SbS-pSY22
[NCBI] 		3384977 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus ruminicola
[NCBI] 		2686210 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM52968.1 [NCBI]
Genbank nucleotide accession
PQ673863.1 [NCBI]
CDS location
range 31250 -> 32746
strand +
CDS
TTGGTAAAAGTGACTTTTAACGGTGTAGAACTTACACAGTATATTACAGTTTTGGAAGGCTTCAGTTTATGGAAAGGCGCTGATTTTGACCCTCAAATTACGGAGAATACAATTTTAAGTGGTTCTGAATTCAATTACACTCGTAGAAAGCATAAAACAATATCAATACCCTTTTATGTTGAATATGAAAGTAGTGAAGGCTATGATTTCCTTCAATCGGCGCTTAATGTGAAAGAGCCAAAAGAATTGACATTTGATATTTACCCTAATCGTGTATTCTATGCTATTCCAAGTGGTGATTTGAATTTTAGTGAATATAGGTTAAGCGGTAAAGGGACTATCAAATTTATCGTTCCAGATGGTCTTGCTCACGCTACTTATACAAGGACGTTTGAATTTGAGAAGAATGATTCAGGAATTTTTGAAGCAGAGATTATTAATGATGGCAGTGAAGAAGTCACTGTTGATTATAAAATAAAGCTTAAAAAAGAATCTGGTTTTATTGCAGTAACTAGTCCTTACGGTCTACTGCAGTATGGGAAATATGACGAAGAAGATGGTTATATTGACCGTAAAAACGTTACTTTGTTATCCAACCAAAAAGGCGACTTTGCCAATTGGAGCGACGGAACTACGTTCTACGAAAATCCAAACAAAATTGTAACCACTCAAATGGGATACGATAGCGAGCTCGGCGGGCGTTTGGGTACTATGCCAGCAAACTTCCCAACAAGCGGAACAGCGGGTGCGTTTGGGTATGGCGCATGTAAAGAGTATATATTAGAAACGCCAGTTGAACAGTGGTATATCTGGGCAAGGGCCTGGTTTGAAACTGGTTTTGAAACACAAAATGGCGAGTGGTGTTTAGCGGTCATTGACGAACAAAATCATCTTTTGGCTGGCATGGCCATAGAAAAGAACAATCGTGTTCAAAACAAAGCCGCAATTCGTTTCCTTTTAGGCGACGGGAATGGTGGTAGCATTGTCAAACGAGAATTTGATTTGACGCCAAGCTTATGGATTCCACCAAATCCGTACGGGAATAACTCACGCATACAAGGTAGCAATATGTTCGACCTTGTCAAAGAAAAAGACCGTGTTCAATTTTTCTACAATGGCGGGTACTATCCTTTTTCGGCCAGTCAATTAAACGGAAAGAAAGCAAAGCGAATTCAATTTTTTGTCGGCAATTATGCAGGTTCGGATAGTTCAGTACGTCAATTCGTGACACACCACTATCTGAACGATTTTACATTTCAAGAGCTACACGTACCTTACTGGAAAGATGTGCCAAACCGCTATCCAACAGGTGCAGTGATTGAAATTGACGGAAGTGCTGGCGAAATTCGAGTTAACAAGCAAATTCGTTTAGATGATGAAATTCTTGGGACGAATTATTTTAAAGTTCCTCCAGGAAAAACAAAAGTTCAGCTCAACATCTCAAGCTTTGGTGAAATTGAAAGTGCCACTGCAACAATCAAGGAGGTGTACGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
54131e1b4624b49c38f60763bd957f1f0d69fc58e6e1ff5b224bac41ac2a3103
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8473
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50