Protein

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Genbank accession
AND75132.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVITLERAYTDSATIGKMTMPSGTVFDTIELPWKDNQPSVSCIPEGLYKLNKRISGVVNRTSKGKYSAGWEVANVKGRTYIMIHIGNKPSDFEGCIGIGEGLGVVGGEWAILRSSTSFDKFMTEMNTSSDWQLSIKVRQGGV
Physico‐chemical
properties
protein length:143 AA
molecular weight: 15625,73410 Da
isoelectric point:8,56232
aromaticity:0,08392
hydropathy:-0,21259

Domains

Domains [InterPro]
IPR043732
STR
5–127
IPR043732
AND75132.1
1 143
Architecture
STR
STR 5-127 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage pf16
[NCBI] 		1815630 Uroviricota > Caudoviricetes > Chakrabartyvirus >
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75132.1 [NCBI]
Genbank nucleotide accession
KU873925.1 [NCBI]
CDS location
range 138579 -> 139010
strand +
CDS
ATGCCAGTTATCACTCTAGAACGCGCTTACACGGATTCTGCTACCATTGGCAAGATGACCATGCCGAGCGGTACCGTGTTCGACACTATCGAACTTCCTTGGAAGGACAACCAACCTTCAGTGTCCTGTATTCCTGAAGGGCTGTACAAGCTGAACAAGCGCATCAGCGGGGTCGTCAATCGAACTTCGAAGGGCAAGTACTCAGCAGGCTGGGAGGTTGCCAATGTCAAAGGACGCACCTACATCATGATCCATATCGGTAACAAGCCGTCTGACTTTGAAGGCTGTATCGGCATCGGTGAAGGGCTGGGTGTCGTGGGTGGCGAGTGGGCTATCCTTCGCAGCTCTACCTCGTTTGACAAGTTCATGACAGAGATGAACACTTCGAGCGATTGGCAGTTGTCGATCAAAGTGCGTCAGGGTGGTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6fd44edee513fa35461e168e8ebae7fa055d386123e341618dde9892f2c675a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of pf16 and phiPMW: Two novel phages infecting Pseudomonas putida PpG1 Magill,D.J., Krylov,V.N., Shaburova,O.V., Allen,C.C.R., McGrath,J.W., Quinn,J.P. and Kulakov,L.A. 2017-09-06 — GenBank