Protein

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Genbank accession
YP_009808572.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,74
Protein sequence
MIENTQPLKMGITDVYPGYTAIYMQHTAYTDVDVQGKMVWVNGTAQTPDVNIDRYYVFAVGLNPGSPYNLEAAYFDAMVDAELRAERFGMAISDPVATATRAEPTINSYTVTAEEVDVGVAPPVLTLDLDGDADLIEAQWAPTGTSNWTGFFYGGFLQTLGVAGLPIGVAIDVRIRGVVNFPDGSTRDLSSWDTLENITLNWGFTPPEKVSNVTFQVAKLKEPAERYDVKISWDWEKLDGANAREFVVWRLDKAKYDSNSASDKWAGAEVINAGTAKSVVVTNHPFDREQVYRVATTAWGPESDDVVYADNIIFKIDDTTTIDNSFTNETGIDLTYSHIRGRVWDDANSVWKQSFNVDAATGNVTIGILDEEGEAPISFTSDGNGNGTVNVKGSVISETINAANFVLTNLNGTQSPQLRSAGKTEYGDSTEGIWMGHEMSGGYRFKFDLGNSAQYIRWDGDTLRISGDVAIGTPQGDRPLYSQVRNIYKAASSTPSTPTQTTYPPSGWSVAPPTVPSGQYLYTSVGLVDLTTSFLVGGESWSTPALTGGTGAPGQDGQDGQDGADGPGFYSQAISGFNGTFRSSTATSFFQSQFGRPPAKYDVLTQYNPSNPSIATTRQWDTASSGAWGTVALAVHGNMVVDGSLTADALIANTILGTNLHIGNTGGSGVYAGIRGNHTSGASLAFVAGYTSVTDNNLPNWKWGVTSNGIMYARNSAGSTRVELNPITDKYSFRGDIIAETLTLTGDIPDAIDNSNVTTSSIGAETPSGAQSKANAAKNSAISTAAADATTKANAAKNSAISTAAADATAKANAAKAAANGYTENRIYPNQNSTVIKSSNYSQGNDGFSMDINGNAEFNNVVVRGVGYFTDGVFDGTVYAENIVGDIVSGIVKNNPASYTGFTYGNTWATVATLVSTGTVRPYPRNLSLRVSNGGAGFSVIVQRDAGFADTVIRLRVVNSTTNNVLWEYSYVYDFTGSNLTSSVTIPSIDGMIPAGEAASSYVLQVSASRNIASIRYMYRTLGTSYRTINSDVVAYLFKDSGELS
Physico‐chemical
properties
protein length:1045 AA
molecular weight: 111266,12800 Da
isoelectric point:4,59369
aromaticity:0,09952
hydropathy:-0,23273

Domains

Domains [InterPro]
IPR057550
STR
10–94
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
100–191
IPR057551 DC_1191
YP_009808572.1
1 1045
Architecture
STR
STR
STR
STR 10-94 | STR 100-192 | STR 206-1034 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpS_PG07
[NCBI] 		2301664 Uroviricota > Caudoviricetes > Demerecviridae > Pogseptimavirus PG07 >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009808572.1 [NCBI]
Genbank nucleotide accession
NC_048041 [NCBI]
CDS location
range 81393 -> 84530
strand -
CDS
ATGATTGAAAACACTCAGCCGCTAAAAATGGGTATCACTGACGTCTACCCAGGATATACGGCCATTTACATGCAACACACGGCCTACACGGACGTAGACGTACAGGGTAAAATGGTTTGGGTCAACGGTACGGCCCAAACCCCTGACGTAAACATTGACAGGTACTATGTATTCGCTGTTGGGCTAAACCCAGGCTCTCCGTACAACCTAGAAGCCGCGTACTTCGATGCCATGGTAGACGCGGAGCTTAGGGCTGAACGTTTTGGTATGGCAATCTCAGACCCCGTGGCTACCGCCACGAGAGCTGAGCCAACCATTAACTCTTATACAGTTACAGCAGAGGAAGTGGACGTGGGTGTGGCTCCTCCCGTTCTTACACTAGACCTAGATGGAGATGCTGACCTTATAGAAGCCCAGTGGGCTCCTACAGGTACTTCAAACTGGACTGGATTCTTCTATGGAGGCTTCCTACAGACTCTAGGAGTGGCCGGCCTACCTATTGGGGTCGCTATAGACGTTCGCATCCGTGGTGTGGTTAACTTCCCAGATGGCAGCACTAGAGACTTAAGCTCTTGGGATACTCTAGAGAACATAACACTTAACTGGGGATTCACTCCACCAGAGAAGGTTAGCAATGTTACTTTCCAGGTAGCCAAATTAAAAGAGCCTGCGGAAAGATACGACGTAAAAATATCTTGGGACTGGGAGAAGCTAGACGGAGCCAATGCTAGAGAATTCGTGGTTTGGAGACTAGACAAAGCCAAATACGACTCCAATAGTGCATCAGATAAATGGGCAGGTGCCGAGGTAATTAACGCAGGTACCGCGAAGTCCGTAGTAGTTACTAACCACCCTTTCGACAGAGAGCAAGTGTATCGAGTAGCTACTACAGCTTGGGGCCCAGAATCCGATGATGTTGTCTACGCAGATAATATTATATTTAAAATCGACGATACGACGACGATTGATAACTCGTTCACTAATGAGACAGGTATTGACCTAACATACTCCCACATTAGAGGAAGAGTATGGGACGACGCTAACTCTGTATGGAAGCAGTCTTTTAATGTAGATGCTGCCACTGGTAACGTTACAATAGGTATACTAGACGAAGAAGGTGAAGCACCGATAAGTTTCACGTCTGACGGCAATGGTAACGGTACAGTGAACGTCAAGGGTTCTGTAATTTCTGAGACGATAAACGCTGCGAACTTTGTGTTAACTAACTTAAACGGTACTCAGTCACCTCAGCTGCGCTCCGCTGGTAAGACTGAGTATGGAGACTCTACAGAGGGTATCTGGATGGGTCACGAGATGTCCGGAGGATATCGATTCAAGTTCGATTTAGGTAACAGTGCTCAGTATATACGTTGGGATGGGGATACTTTAAGGATTTCTGGAGACGTTGCTATAGGTACTCCTCAAGGGGACAGGCCTCTGTACTCTCAGGTAAGAAATATCTATAAAGCAGCCTCGTCCACTCCAAGCACTCCGACACAGACTACATATCCACCTTCCGGATGGTCTGTAGCTCCACCTACAGTACCTTCAGGACAATACCTATATACTTCAGTGGGCTTGGTAGACCTTACTACTTCCTTCCTAGTAGGCGGAGAGAGCTGGTCAACCCCTGCTCTTACTGGAGGCACGGGAGCCCCTGGACAAGATGGTCAAGATGGACAAGATGGAGCTGATGGTCCGGGGTTTTACTCTCAGGCTATCTCTGGGTTTAATGGAACCTTCCGGTCTAGTACAGCTACCTCTTTCTTCCAATCTCAATTTGGAAGACCACCGGCTAAGTATGATGTCCTAACTCAGTATAACCCAAGTAACCCGTCCATCGCTACTACTAGACAATGGGATACTGCATCCTCTGGAGCATGGGGGACTGTAGCCTTAGCTGTTCACGGTAACATGGTGGTTGATGGGTCGTTGACGGCGGACGCCCTGATAGCTAATACTATCTTAGGTACGAACCTGCATATAGGAAATACCGGAGGTAGTGGAGTTTACGCAGGTATTCGTGGTAATCATACATCTGGTGCTAGTCTAGCTTTTGTTGCAGGGTATACTTCCGTAACAGATAACAACCTACCTAACTGGAAGTGGGGTGTGACCTCTAACGGTATCATGTACGCAAGGAACTCTGCAGGAAGCACTAGGGTTGAGCTTAACCCTATAACTGACAAGTATTCCTTCCGAGGGGATATTATAGCAGAGACGCTGACACTTACCGGAGACATACCAGACGCCATTGATAATAGCAATGTGACAACGTCTAGTATCGGGGCTGAAACTCCCTCTGGTGCGCAGTCTAAGGCAAACGCGGCTAAAAACTCAGCTATTAGTACGGCCGCAGCAGATGCTACGACTAAGGCAAACGCGGCTAAAAACTCAGCTATTAGTACGGCCGCAGCGGACGCCACCGCAAAGGCCAATGCAGCGAAAGCAGCAGCTAATGGATATACAGAGAATAGGATATATCCTAATCAGAACTCTACAGTTATTAAGTCCTCTAATTACTCTCAGGGTAACGACGGGTTCTCTATGGATATTAACGGCAACGCAGAGTTTAACAATGTAGTTGTTCGTGGTGTTGGTTACTTCACTGATGGTGTGTTCGATGGCACCGTATACGCTGAGAACATAGTAGGGGATATCGTTTCAGGGATAGTTAAGAACAACCCCGCTAGCTACACAGGTTTTACTTACGGAAACACTTGGGCTACTGTAGCTACTTTAGTTTCCACAGGTACCGTTAGGCCTTACCCTCGAAATTTAAGTTTAAGGGTGTCTAATGGGGGAGCGGGGTTCTCTGTGATAGTACAACGTGATGCTGGCTTTGCTGACACCGTTATAAGGTTAAGGGTTGTAAACTCTACCACTAATAACGTTCTATGGGAGTATAGCTATGTATATGACTTTACTGGAAGTAACCTAACCTCATCAGTAACTATCCCTTCGATAGATGGTATGATACCAGCTGGTGAGGCTGCCTCCTCCTACGTATTACAGGTGTCCGCTAGTAGAAATATAGCTTCTATTAGGTATATGTACCGTACCCTAGGTACATCTTACCGCACCATTAACTCGGATGTTGTAGCATACCTATTCAAAGACTCAGGGGAGTTATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37ac08c41072802fd8d2749ede529978eff046fbbaab96fbd22667499c1f2783
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing of PG07 Ding,T. — — GenBank