Protein

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Genbank accession
XSB47479.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDDMTGNLTLTNNASLTLPRRINFVSDNSSAVYTVATRSDNNAVTDPFPSSETRVYSLLVNTKSHTSDPAGGATLAAHLFNQKASGAGSMFIQVFGPPNKTTGASGSVTGQLLMNGENGQLQMTGSGLTIGMQTVVNGTMFAQQMAVKGDGNKNLFFQDAGGNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVGVDYDSQGTNSAILRVDTSGDGNGVGDGVTHLGYKDGNGRYNHYFRGTGSIYLTNKLGTIFTSQSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGTYRLATGSTDAQEEFQITSAGNIRARVEVQSSSCGSAGQFRAVQGDYGFFIRNDGNNTYFMLTPSGNPYGTWGTLRPLTISNSAGTVTMSNGVNVGSGLDVSGAAKFNNGLGCGTANGLGAAAISLGDNDTGFVQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDIDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:738 AA
molecular weight: 78286,79880 Da
isoelectric point:5,72507
aromaticity:0,08130
hydropathy:-0,32168

Domains

Domains [InterPro]
DC_0152
STR
1–738
DC_0152
IPR048390
ATT
413–474
IPR048390 G3DSA:6.20.80.10 IPR051577 Coil
IPR030392
CHP
641–736
IPR030392
IPR030392
CHP
641–699
IPR030392
XSB47479.1
1 738
Architecture
STR
ATT
STR
STR 1-412 | ATT 413-474 | STR 475-738
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSB47479.1
1 738
Domain Start End Length (AA) Confidence
N-terminal 1 465 465 0,1249
Central domain 466 664 200 0,1904
C-terminal 665 738 73 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-465
Central
466-664
C-terminal
665-738

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage D6b
[NCBI] 		3413496 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sp.
[NCBI] 		1888169 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB47479.1 [NCBI]
Genbank nucleotide accession
PV417214 [NCBI]
CDS location
range 161828 -> 164044
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGCGACGATATGACAGGCAACTTGACATTAACGAACAATGCTTCATTAACGCTCCCTCGTCGCATCAATTTTGTTTCTGATAATTCATCGGCGGTGTATACTGTTGCAACGCGTTCTGATAACAACGCAGTTACAGATCCATTTCCATCATCGGAAACTCGCGTATACAGTTTATTAGTTAATACCAAATCGCATACAAGCGATCCTGCGGGTGGTGCTACTTTAGCCGCACATCTGTTTAACCAGAAAGCATCCGGTGCTGGTTCGATGTTTATACAGGTATTTGGCCCACCTAACAAGACAACAGGTGCTTCTGGATCGGTGACCGGACAACTGTTGATGAACGGGGAAAACGGTCAACTACAAATGACAGGTTCCGGTTTAACGATCGGGATGCAAACCGTTGTTAATGGTACGATGTTCGCTCAACAAATGGCGGTTAAAGGCGACGGAAACAAAAACCTGTTCTTCCAGGATGCTGGCGGTAATGAGCTTAGTTTGATCTATGCTGATACAGGAAAGAACTTATATGTTCGTACTGGTGGTGGTGCATATGCAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACCGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTGTTCAATAACCGTGCTTCTGTAGGCGTAGATTACGATTCGCAAGGAACAAACTCAGCGATTCTTCGTGTTGATACAAGCGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGGTATAAAGATGGTAACGGAAGATATAACCATTATTTCCGTGGTACTGGTTCAATTTATCTGACTAACAAATTAGGTACTATCTTTACGTCACAATCATATTATAATGATGTTCCCCAGGGTACGCCAGCGCAATATTTCTTGCCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGTCAATTCCGTGGTGGTAATGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTACATATCGTTTAGCAACAGGCAGCACCGATGCACAGGAAGAGTTTCAGATCACCAGTGCTGGTAATATCCGCGCCCGTGTTGAAGTTCAGAGTTCTTCATGTGGTTCCGCTGGACAGTTCCGAGCGGTTCAGGGCGACTATGGATTCTTTATCCGAAACGATGGAAACAACACCTATTTTATGTTGACTCCTTCCGGCAACCCTTACGGTACATGGGGTACTCTGCGTCCGCTTACGATAAGCAACTCCGCCGGGACAGTAACAATGTCAAACGGTGTTAACGTTGGCAGTGGATTAGATGTCAGTGGTGCTGCTAAGTTTAATAACGGTCTTGGTTGCGGAACTGCAAACGGTTTAGGCGCTGCTGCGATTTCGCTAGGTGATAATGATACAGGTTTTGTTCAAGAAGGTGACGGTATTCTTAACGCTTACGCAAACAGCCAGCGTATTATGCGATGGACTACTGGCGCAACTGCTAACTATAAACAGTTGCAGGTTCAGGGTGTTAACGGGCCAGCATTACTTCTGAATAACACAGCGACTAACCAATCATGTTATTTGCTGATTACTTTGGCGGGTAACAACGGTGCGTACTTCGGATTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACAACCTTACAATTACGTACTTCGGATCTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCTGATATTCGACTGAAATCTAATTTGGTTGAATTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTACATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATATCATCGTGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTACCGGAAGCAGTGCGCGAAGACATCGACACTGGTATGTTAACCATTTCACCTTCGGGAATTAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6cd32809061403635c85c40b8972db7a2572b4f98c6378679c2b29939345ec1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Application of a phage cocktail for the control of Cronobacter and their biofilm elimination on stainless steel surface Luo,D. and Zeng,H. 2025-11 — GenBank