Protein

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Genbank accession
YP_009293492.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MHTLSPAIVAKSGKKYRSDDTEAIRKNLGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPAAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTIYSSLMKPTAGDVGALPITGGQLNGPLSIGTDNALGGNSIVLGDNDTGFKQNGDGILDTYANNQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFKLWGDANRPTVIELDDDQGWQLYSQRNPDGSVLFTVNGDITANVLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGNQWYTVQGGTV
Physico‐chemical
properties
protein length:441 AA
molecular weight: 46808,43630 Da
isoelectric point:5,31004
aromaticity:0,08617
hydropathy:-0,27324

Domains

Domains [InterPro]
DC_2005
STR
31–321
DC_2005 G3DSA:6.20.70.20
IPR051934
Unmapped
221–440
IPR051934
DC_0801
RBD
370–438
DC_0801
YP_009293492.1
1 441
Architecture
STR
RBD
STR 31-321 | RBD 345-438 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SJ46
[NCBI] 		1815968 Uroviricota > Caudoviricetes > Punavirus >
Host Salmonella enterica subsp. enterica serovar Indiana
[NCBI] 		286783 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009293492.1 [NCBI]
Genbank nucleotide accession
NC_031129.1 [NCBI]
CDS location
range 31856 -> 33181
strand -
CDS
TTGCATACTTTATCACCAGCGATTGTTGCTAAAAGCGGGAAAAAATATCGTTCAGACGACACGGAGGCAATTCGCAAAAACCTTGGTTTAGGAGAAACGATAAATCTCGCTGCGGGTGCACTGCAAAAATCGCAGAATGGCGGCGATATTCCGGACAAAAAACAATTTGCGAGAACTATCGGCGCGGTAACATCGACTACCATTACACTTGGTGAATCAGGCTGGTTCAAAATCGCCACGGTTGTAATGCCGCAGGCTACATCAACAGCGGTGATTAAACTGTACGGTGGGGCGGGGTTTAACGCTGGTTCACCTGAACAGGCGGCAATCAGCGAACTGGTATTGCGTGCCGGTAATGGCTCACCTGTTGGAATAACTGCCACGTTGTGGAGACGCTCGCCTGCTGCGGCTAACGAGGTCGCATGGGTTAATACATCAGGCGACACCTACGATATTTATATTAATATCGGCCAGTATGCGTACTGGTTAATTGCGCAATATGACTACACCGGTAATGCAAATGTCACGTTGCACAGTACGCCTGAATATTCATCAGTACAGCCGGGAAACTCAACCAGCGGTCAGACATATACAATTTACAGTAGTCTGATGAAACCAACAGCCGGTGATGTGGGTGCATTGCCGATTACAGGGGGACAGCTAAACGGTCCGTTAAGCATTGGTACTGACAATGCACTGGGCGGTAATTCAATTGTACTCGGTGATAACGATACCGGTTTTAAACAGAACGGTGACGGGATACTGGATACATACGCGAACAACCAGCACACCGTTCGTGTCGCTCCCGGTGAAATGATGGTTCTGGGAGCTATTCGCGCAGGCAAAGAAAAAAAACTGTCACTAACGAGTAATAATAATTCGACAATGACAGCCACGTTTAAATTATGGGGCGACGCAAACAGGCCCACTGTAATTGAACTGGATGATGATCAGGGATGGCAGTTATACAGCCAGCGAAACCCTGATGGTTCAGTCCTGTTTACGGTCAATGGCGATATCACCGCTAACGTACTGCGTGCAGGCGGGGCCATCTATCAGAATAACGGTGATATCTTTGGTTCGCTATGGGGAAATGGCTGGTTAAGTACCTGGATTAATAATAATCTCGTCTTAGATGTTCAGTTAGGGGCCGGCACATCAGTGACTACCTGGAACAATGCAGGGTCATGGCCTAACACTCCCGGATATGTAGTTACCTCCGTCTGGAAAGATTATCAGGGCGAAAATATTGATGGTATTAATTATGCGCCTTTGCAAAAACGAGTCGGGAATCAGTGGTATACCGTACAAGGGGGAACGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9254172ccf6817903bcb273d30de01853d1bde48035ad46df3631856b460fd85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7560
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50