Protein

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Genbank accession
ASV43933.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MATYTAKRVSIDNESKLVSITSGEIPQSINRGDFLCVAQFPPMEISHTYVNNGVPEVHLEKRWEYGQQVDSPAIVIPTTVNFRDTVTALKNANTLLNDNTQAMQNWQTGLGEVEFKNIDGTKTTTKTLKQMELDYQATIQGTDINAQAMLDWQTELGEVTFTNLDGTTTTIKTVRQLELEANNALIGAVSSNNEAITNALNETLSAKAELDTAIEVASETMSTSNTLAQTMAQAQEDINTTVSEVNVVAESLNNTVSNAIDNTQAMLDWQTQLGEVDFLNADGTTTTLKTIKQMELESAQALAVSIEGAMTAITQRDREAYTKTIEAASTGRNSVFWDNQGNPNVMVWINRFNCEDINQAILDKWGVDCQLGTGTHPAFIKQGQEMRGFWYGKYQASESLTGGCSVVDGAAPLVNISFDDAKTLCKSKGENWHMASNSEWAAVAYLSLAHGQALRGNTDRGRAHDAKNETGRRMDNLAPGDLGGEGFTGTGTGPNTWSHDGTAFGVFDLVGNVGEWVDQLKIQDGQIICPNENNDEISEYAWYAHEVYYDVDNLTDRNISLNSHLDNIQGIMGNGANSGASAITPFSQVLKSPEYMGTTLMRQVALECPTALQGLKGSVFARNFGERLPFRGGAQFTGGDAGLAAINLHYNRLSELDSVGFRPALFESESTYVLRQEPRYVPRIGGSKQYYILSSPIVIPENADFKISFYIQGLDRGYEGLFSDSKNEGPWMRLMAEAQFNNIQGYDDEGYYSEIPYQDVTLRDGLLHKLAVLRVDGELYTQVDDETPVYARDSTSAWEFDLLCKFKTSYFSGVFTDFEVEIDQVVVLSLPLTNKEQGDVQLPTVGDITATMHNYTPSVWEREGTPQISYAYADGQTQFWVFDTPIPLPAGSILRYKFIYRGGEGNVNYLHANSENSPSFYGYVSNLNQEIDLQGEVAGESFIDGEDLSTTLTVETNKVYMATVKVASDTDLSQLLKFQSVPKFTEGCIFDVEVLNDQLKVIYANPLTNRAQGEVQAPTVGTISATMANFTPLIWENHEEL
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 114722,03320 Da
isoelectric point:4,46961
aromaticity:0,09030
hydropathy:-0,34947

Domains

Domains [InterPro]
DC_1066
STR
78–676
DC_1066
IPR042095
STR
367–665
IPR042095
IPR016187
Unmapped
402–664
IPR016187
IPR005532
RBD
410–543
IPR005532
ASV43933.1
1 1041
Architecture
STR
STR 78-676 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASV43933.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 700 700 0,5038
Central domain 701 901 202 0,4740
C-terminal 902 1041 139 0,4043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-700
Central
701-901
C-terminal
902-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage KB12-38
[NCBI] 		2024350 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV43933.1 [NCBI]
Genbank nucleotide accession
MF098558 [NCBI]
CDS location
range 1 -> 3126
strand -
CDS
ATGGCAACGTATACCGCAAAAAGAGTTAGTATTGATAATGAGTCAAAACTTGTTTCAATTACGAGTGGTGAAATACCACAGAGTATAAATCGAGGTGATTTTTTATGTGTGGCTCAGTTTCCACCTATGGAAATTAGCCATACGTATGTAAATAATGGGGTGCCTGAAGTTCATCTTGAAAAACGATGGGAGTACGGGCAACAAGTAGATTCCCCTGCGATTGTTATACCCACAACTGTTAATTTTAGAGACACCGTAACGGCTCTTAAGAATGCTAATACCTTGTTAAACGATAACACTCAGGCAATGCAAAATTGGCAAACAGGCCTTGGTGAAGTTGAGTTTAAAAATATTGATGGCACTAAAACAACCACAAAAACCTTGAAACAAATGGAGCTAGATTATCAAGCCACAATCCAAGGCACAGATATCAACGCACAAGCAATGCTGGATTGGCAAACCGAATTAGGTGAGGTTACATTTACAAACCTAGATGGTACGACCACGACCATTAAAACAGTTAGGCAACTAGAGCTTGAAGCGAATAATGCTCTAATCGGTGCGGTAAGCTCGAACAATGAAGCTATTACCAATGCACTAAACGAAACACTAAGCGCTAAAGCCGAACTAGACACAGCAATTGAAGTGGCTAGCGAAACAATGAGTACATCTAACACATTAGCTCAAACAATGGCCCAAGCTCAAGAGGATATTAATACCACCGTATCTGAGGTAAATGTGGTTGCGGAGAGTCTAAATAACACTGTAAGTAATGCTATAGATAACACGCAAGCTATGCTGGACTGGCAGACCCAATTAGGTGAAGTTGATTTCTTAAATGCCGATGGTACAACAACGACTCTTAAAACGATTAAGCAAATGGAACTGGAGTCCGCCCAAGCGTTGGCCGTGTCTATTGAAGGAGCTATGACAGCCATTACTCAACGTGACCGCGAGGCCTATACAAAAACAATTGAAGCAGCCAGTACGGGCAGAAATTCCGTATTTTGGGATAACCAAGGCAACCCCAATGTAATGGTGTGGATCAACAGGTTTAATTGTGAAGATATTAACCAAGCTATTTTAGATAAATGGGGAGTTGATTGTCAGCTTGGAACTGGTACCCACCCTGCATTTATTAAACAAGGCCAAGAAATGCGGGGGTTTTGGTACGGGAAATATCAAGCTAGTGAAAGTTTAACCGGTGGCTGTAGCGTTGTTGATGGAGCCGCCCCCTTAGTTAATATCAGCTTTGATGACGCTAAGACGCTGTGCAAAAGCAAAGGCGAAAACTGGCACATGGCCAGTAATTCAGAGTGGGCTGCGGTTGCATATCTGTCACTGGCTCACGGCCAAGCATTAAGGGGCAACACAGACAGAGGCCGCGCCCATGATGCTAAAAATGAAACTGGCCGAAGGATGGATAACCTAGCGCCTGGAGATTTAGGCGGTGAGGGATTTACGGGCACAGGCACAGGCCCCAACACATGGAGCCATGACGGCACGGCTTTTGGTGTGTTCGATTTAGTGGGCAATGTGGGAGAGTGGGTTGACCAACTTAAAATTCAAGACGGCCAGATTATTTGCCCCAATGAAAACAACGATGAAATCTCAGAATATGCATGGTACGCCCATGAGGTTTATTATGATGTCGATAACCTAACGGACAGAAATATAAGTTTAAACAGCCATCTTGATAATATTCAAGGCATTATGGGTAATGGGGCAAATTCAGGAGCCTCAGCTATCACCCCGTTTAGTCAGGTTCTTAAATCTCCTGAATATATGGGTACTACGTTAATGCGCCAAGTGGCGTTGGAGTGTCCTACAGCGTTACAAGGTTTAAAAGGTAGTGTATTCGCCCGCAACTTTGGGGAGCGCCTACCATTTCGTGGTGGTGCGCAATTCACGGGGGGGGATGCGGGTTTAGCGGCTATAAACTTACATTACAACAGGTTGTCAGAATTAGACTCCGTTGGGTTTAGACCGGCTTTATTTGAAAGTGAAAGTACTTATGTCCTGAGGCAAGAACCTCGTTATGTACCTCGAATTGGGGGATCAAAACAATATTATATTCTAAGCTCCCCTATTGTAATACCTGAAAACGCCGATTTTAAAATCAGCTTTTATATTCAAGGGTTAGATCGTGGGTATGAGGGACTTTTCTCGGATTCTAAAAATGAAGGCCCTTGGATGAGACTTATGGCCGAAGCCCAATTTAACAATATACAAGGCTATGATGACGAGGGATATTACTCCGAAATACCTTATCAAGACGTAACACTTAGAGACGGCCTTTTGCATAAGTTAGCAGTACTTAGGGTAGATGGAGAACTATATACGCAGGTGGATGATGAAACCCCTGTTTATGCTAGGGATTCCACTTCAGCATGGGAATTTGATTTACTTTGTAAATTTAAGACGAGTTACTTTAGCGGAGTGTTTACGGATTTTGAAGTGGAGATTGACCAAGTTGTTGTCCTTAGCTTGCCACTAACAAATAAAGAACAAGGAGACGTTCAATTACCCACAGTCGGGGATATAACGGCCACGATGCACAACTATACCCCTTCCGTTTGGGAACGTGAGGGCACCCCACAAATAAGTTATGCCTATGCCGATGGGCAAACGCAGTTTTGGGTTTTTGATACCCCAATACCCTTACCGGCGGGGAGTATTCTTAGGTATAAATTTATTTATAGGGGAGGGGAAGGCAACGTTAACTACTTACACGCTAACAGCGAAAATAGCCCTAGTTTCTATGGTTATGTTTCAAACTTAAATCAAGAGATAGATCTTCAAGGCGAAGTCGCTGGTGAGTCTTTTATTGATGGTGAGGACTTAAGTACAACGCTTACAGTTGAAACTAACAAAGTGTATATGGCAACTGTGAAAGTCGCCTCGGACACCGACTTATCGCAATTGTTAAAATTTCAAAGTGTCCCTAAGTTTACGGAGGGCTGTATCTTTGATGTTGAGGTCTTAAATGACCAGTTAAAAGTTATTTACGCAAACCCGCTTACCAATCGAGCTCAAGGCGAGGTTCAAGCCCCCACCGTAGGTACAATATCCGCTACCATGGCAAACTTCACACCGCTAATTTGGGAAAACCACGAGGAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ca2ce86d1ba10dfb313668bdec9c2c62108026d2148d6eb8fac22505c730b32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of an active prophage infecting a marine Pseudoalteromonas isolated from a marine flatworm Zablocki,O.D.J., van Zyl,L.J. and Trindade,M.I. 2014-12 — GenBank