Protein

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Genbank accession
WVX87611.1 [GenBank]
Protein name
DNA stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIQQLPLMKGVGKDYHNADYIDYLPVNMLATPKEVLNSSGYLRSFPGISKRGDVNGVSRGVQYNTAQNAVYRVCGGKLYKGNSDVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGTIKTMANWPADSDYTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGGEQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:472 AA
molecular weight: 52277,24860 Da
isoelectric point:5,83966
aromaticity:0,10593
hydropathy:-0,27797

Domains

Domains [InterPro]
IPR021098
STR
4–472
IPR021098
WVX87611.1
1 472
Architecture
STR
STR 4-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX87611.1
1 472
Domain Start End Length (AA) Confidence
N-terminal 1 339 339 0,7552
Central domain 340 461 123 0,2103
C-terminal 462 472 10 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-339
Central
340-461
C-terminal
462-472

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage NM-3
[NCBI] 		3102707 No lineage information
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87611.1 [NCBI]
Genbank nucleotide accession
PP083692 [NCBI]
CDS location
range 4513 -> 5931
strand +
CDS
ATGCCGATTCAGCAATTGCCGTTAATGAAAGGAGTCGGTAAAGACTACCATAACGCCGACTATATCGATTATCTGCCAGTGAATATGTTGGCAACACCGAAAGAAGTCCTCAACTCATCGGGTTATTTACGCTCATTCCCCGGCATATCCAAGCGCGGAGACGTTAACGGTGTATCGCGTGGTGTCCAGTACAACACCGCTCAGAACGCCGTATATCGGGTTTGCGGTGGCAAGCTGTATAAGGGGAATAGCGATGTTGGAGACGTTGCCGGGTCAGGCCGCGTATCAATGGCTCACGGTCGAACTTCTCAGGCAGTAGGTGTGAACGGTCAGCTTATCGAGTACCGATACGATGGCACCATTAAGACAATGGCAAACTGGCCTGCAGACAGCGATTACACGCAGTATGAGTTAGGCTCTGTTCGGGATATTACTCGCTTACGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTCATGGTTTATCACTGACCTCGAAGATGAATCGCATCCTGACCGCTACAGTGCAGAATATCGCGCAGAATCGCAACCTGACGGGATAATTGGCATAGGTTCATGGCGAGATTTCATCGTCTGCTTTGGCTCGTCGACGATAGAGTATTTCTCGCTTACCGGAGCAACCACCGCTGGCGCTGCGCTGTATGTCGCACAGCCATCGTTGATGGTACAGAAGGGCATTGCCGGAACATACTGTAAAACGCCATTCGCTGACTCATATGCATTCATCAGTCATCCGGCTACTGGCGCACCTTCCGTCTACATCATCGGGTCAGGGCAAGCTTCACCAATTGCGACGGCCAGTATTGAGAAGATTATCCGCTCATACACAGCTGAAGAACTGGCGACTGGTGTAATGGAGACTTTGCGCTTCGATTCTCATGAGCTTCTGATTATTCATCTCCCTCGTCATGTTCTGGTTTACGACGCATCGTCAAGTCAGAACGGACCGCAATGGTGTGTGCTGAAAACAGGTTTATACGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGGAAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGACTGGGAAATTGCAATTTGACATTAGTAGTCAGTACGACAAGCAGCAAGAACACCTGTTGTTTACGCCCCTCTTCAAGGCAGATAACGCCAGATGCTTCGACCTCGAAGTTGAATCATCCACTGGTGTTGCTCAATACGCTGACCGCCTGTTCCTGTCTGCAACCACAGACGGAATCAATTACGGTGGCGAACAGATGATTGAGCAGAATGAGCCGTTTGTGTACGACAAGAGAGTTTTATGGAAGCGTGTAGGTCGTATTCGTCGATTAATCGGATTCAAACTGCGGGTAATCACCAAATCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16225a19a10bbed612a02358de05858f16e4ae9b36e082d22f51630c418d9140
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8563
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50