Protein

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Genbank accession
QIG60644.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTSNPDELAKVKSSGDAVAIGTTNQITAAYVYKQNAWQPIATNFKGDKGAPGAPGDGIDYSHLTQGQIPKWDATAKRFTNSGVTSKEDGSITLEPASLHLGSHSISSSAENVTFTNVVTNKVYAPLWQEVGYGTKTGYIRSHGPRLEVELETDNSKDLINPFFNYTAPADASLFGARIEVAQDATNVEVHVLLNNEELWLVRLGDLSAGEQDIFFPNPADFKAGNTYDVRVSSSDGSDVILKGSQYDTPKATLHVAKWTDEIVASQEWLKTLKLVNDITLSGDQFSFTMLDGTSKTVTLPVGGSAKAAPYNFIELLTDRGISVSELTNSTPIFSFEEDTSITLTMPATSTLPVGRDSAFIVENRTTTPAAVVEVKASNTDIVNRPGLTSFNVPTNHTILFVSNVASNSWHAIVLASGGTGGSSLNEGQVVKALETTSSGKDLLVRYYDDTSSTLTFNPWVDDIAKLNKAVSDLERHLKNKTKFYVYKGDTIPTDVPRGSRGGYYFTFYGTTSELTLTTPVTASKISDGTILFIDNNSPDYSVTVNTPQGETIAGQASVSIAPEAAAWYVRNDNNWQELYSGFLPRSHKDLINEMKALVSADNNFIRNLNVQSDDPTQTAVAATSLEFKGFDVTTPADDTTKGIIKFKGATFENPDGSKVVTDVLKLVGMEVVDPGDGTPPKLMLTGGALPLPHPTSAYAFFDAAATVPDTVDFTSLTKFTNGKVTVTKSTADPQYAYILIPAAEGAGADRIGEQGGLPAFWDKSSKTYTVNGQSETFTVFRSPYPLKEQDVTLIIYH
Physico‐chemical
properties
protein length:835 AA
molecular weight: 89708,67410 Da
isoelectric point:4,89522
aromaticity:0,09341
hydropathy:-0,26132

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPT02
[NCBI] 		2698726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG60644.1 [NCBI]
Genbank nucleotide accession
MN954399.1 [NCBI]
CDS location
range 35206 -> 37713
strand -
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGTGCAGTTGACATTTTCACAAAGAAAGATGGAAACCCTGCCATATTCGCCAACACTGGTGCTAGAGACACATATTTTACATCAAACCCAGATGAATTAGCGAAAGTTAAATCTTCTGGTGACGCAGTTGCTATTGGTACAACTAACCAAATTACAGCAGCTTACGTATATAAACAAAACGCGTGGCAACCTATTGCTACTAACTTCAAAGGAGATAAAGGTGCTCCAGGTGCTCCTGGCGATGGTATTGATTACAGCCATCTTACTCAAGGACAAATTCCTAAATGGGACGCGACTGCTAAGAGATTTACTAATTCAGGTGTTACTTCGAAAGAAGATGGCTCGATTACCCTAGAGCCTGCATCATTACATCTAGGCTCACATTCTATTTCAAGTAGCGCGGAAAACGTAACCTTTACTAACGTAGTTACAAATAAAGTGTACGCTCCTTTATGGCAAGAAGTAGGCTACGGAACTAAAACAGGGTATATTAGGTCCCATGGCCCAAGACTAGAAGTAGAGCTAGAAACAGATAACAGTAAAGATTTAATAAACCCTTTCTTCAACTATACAGCACCTGCCGATGCCTCTCTATTCGGTGCTAGAATAGAAGTAGCTCAAGATGCTACCAACGTAGAAGTGCATGTATTATTAAATAATGAAGAGTTATGGTTAGTTAGGTTAGGGGATTTATCTGCCGGAGAACAGGATATTTTCTTCCCAAACCCAGCAGACTTTAAAGCAGGTAATACCTATGATGTTAGGGTGTCTAGCTCTGATGGGTCTGACGTTATACTTAAAGGTAGTCAGTATGACACTCCAAAAGCTACGTTACATGTAGCTAAGTGGACAGACGAGATAGTAGCTTCTCAAGAATGGTTAAAAACCCTAAAATTAGTAAATGACATTACATTAAGTGGTGATCAGTTCAGTTTTACAATGCTGGATGGTACTAGTAAGACTGTTACACTACCTGTTGGGGGTTCGGCTAAAGCAGCACCGTACAACTTTATAGAGTTGTTAACAGATAGGGGCATCTCAGTATCCGAACTGACTAACTCTACTCCTATTTTTAGTTTTGAAGAAGATACTTCTATTACTCTTACAATGCCTGCTACAAGTACTCTTCCGGTAGGTCGAGATAGTGCATTTATAGTAGAAAATAGGACTACTACACCCGCAGCAGTAGTAGAAGTAAAAGCAAGTAACACAGATATAGTTAATAGGCCTGGACTTACTTCTTTCAATGTGCCTACCAACCATACCATACTATTTGTAAGCAACGTAGCAAGCAACTCCTGGCATGCAATAGTGCTGGCCTCTGGTGGCACCGGTGGTTCTAGTTTGAACGAGGGGCAAGTAGTAAAAGCTCTAGAAACTACATCTAGTGGTAAAGACTTACTTGTACGCTACTACGACGATACCAGTTCTACCCTTACGTTCAACCCATGGGTAGACGATATTGCCAAACTAAATAAAGCTGTATCTGACTTAGAAAGACACCTAAAAAACAAAACTAAGTTTTATGTATATAAAGGTGATACTATACCTACCGATGTGCCTAGAGGTTCTCGCGGAGGGTACTACTTTACTTTCTATGGTACAACTTCTGAGCTAACTCTCACAACCCCTGTAACAGCTAGTAAGATTAGTGATGGTACTATATTATTCATAGATAATAATTCACCTGATTATTCTGTAACAGTAAACACACCGCAAGGAGAGACAATAGCAGGGCAGGCATCTGTATCTATAGCTCCTGAAGCCGCCGCATGGTATGTTAGAAATGACAATAACTGGCAGGAATTATACTCTGGATTTTTACCGCGCTCCCACAAAGATCTTATTAACGAGATGAAGGCGTTAGTGAGTGCTGATAATAACTTTATTCGTAACTTAAATGTACAGAGTGATGATCCTACCCAAACTGCTGTAGCTGCTACTTCATTGGAATTCAAAGGTTTTGATGTTACTACTCCTGCTGATGATACTACAAAAGGTATTATTAAGTTCAAAGGAGCTACATTCGAGAACCCTGATGGTAGTAAAGTAGTTACAGATGTATTGAAACTTGTTGGTATGGAAGTTGTTGATCCAGGCGATGGTACACCACCAAAACTAATGTTAACTGGTGGAGCGTTACCTCTACCACACCCAACTAGCGCATATGCATTCTTTGATGCAGCTGCTACAGTACCAGATACAGTAGACTTCACTTCATTAACTAAGTTTACTAACGGTAAGGTTACAGTTACTAAATCTACTGCTGACCCTCAATATGCGTATATTCTTATTCCTGCTGCTGAAGGGGCAGGGGCTGACCGTATTGGAGAGCAAGGTGGACTACCTGCATTCTGGGATAAAAGCTCTAAAACTTATACCGTCAATGGACAGAGTGAAACATTCACAGTGTTCCGTTCTCCTTACCCACTAAAAGAGCAGGACGTTACACTAATAATTTACCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ac26a267307023bb832b32842eb5629eca9565ad6e4c770306ff30a3bcc8b85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6520
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage VpT02 Kim,B.S. and Kim,M. 2012-06-15 — GenBank