Protein

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Genbank accession
QIW88496.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MVKIGYSISDISAIKALPTALLQNGYARLCRSVNAWFSYNPTSTATADDVSILLPASGIGRWFKLKADVAATDVLNFSEAVDDRVAALVQNSSTISASYNDAANTLTFSVVNGSIGDTQVSSLSQSKITNLTTDLAAKLSANQNITISGDATGNGSTSITLTLANTGVTAGSYTNANITVDTKGRIISAANGTSGGLANPMTNKGDIIVSSDNSGTPARLAPNNTTDLKYLSQYIAGSTLANWTPASITTGLWLDAADSSTFSLSSGTVTQWNDKSGNNRNAAQSNSSYKPTLVTNILNSKPVVRFDGSNDTLQVPTLPTNANTTYFVVCKTNTDGKYIFGHSPDGYTTEIRLFSDGSFVGYWGGNYKFNIASNVFRTAYSIGVLNIESTNTSVYTNGNFISTSATYTTVSPTTFPPFDIGSYRLSPSFMNGDIAEIIVVYGTMLLGDIQKIEGYLAYKWGLQSNLPSDHPYKTVQPTTGDSGSLTTAWKTVNSPIVTTSIKTANYNAFAYERIPCNTSESSFSITLPSTGSILIYDAIATTLSNGFGVNSLTILPNSGDTIMGSSSLVLSTGGTSIELEKIGTDWRIISKFTL
Physico‐chemical
properties
protein length:594 AA
molecular weight: 62786,05540 Da
isoelectric point:5,21693
aromaticity:0,08923
hydropathy:-0,06498

Domains

Domains [InterPro]
DC_0797
STR
196–594
DC_0797
IPR013320
STR
270–439
IPR013320
QIW88496.1
1 594
Architecture
STR
STR 196-594
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88496.1 [NCBI]
Genbank nucleotide accession
MT234670 [NCBI]
CDS location
range 64954 -> 66738
strand -
CDS
ATGGTCAAAATAGGATATTCAATTTCAGACATAAGCGCAATCAAGGCTCTTCCAACAGCTTTGCTTCAGAATGGCTATGCGCGACTTTGCAGGTCTGTCAATGCTTGGTTTAGCTATAATCCAACTTCTACGGCTACTGCTGATGATGTATCGATATTGTTGCCAGCTTCAGGGATAGGGCGATGGTTCAAACTAAAGGCGGATGTAGCAGCAACCGATGTACTTAACTTTAGCGAGGCAGTTGATGACAGAGTAGCAGCACTTGTACAGAATAGTTCAACAATCAGTGCCAGCTACAATGATGCAGCTAATACACTTACTTTTTCGGTGGTTAATGGGAGTATTGGAGATACGCAGGTCAGTAGCCTTAGCCAGTCGAAAATTACAAATTTAACAACAGATTTAGCAGCAAAACTTTCGGCAAATCAAAATATTACTATATCTGGTGATGCAACTGGAAATGGGTCAACAAGTATTACATTGACTCTTGCTAATACAGGGGTTACAGCAGGAAGCTATACTAATGCAAATATAACTGTAGATACTAAAGGGAGAATTATAAGTGCAGCTAATGGGACTAGTGGAGGACTAGCTAATCCTATGACAAATAAAGGAGATATTATTGTATCTTCTGACAACTCTGGTACTCCTGCAAGACTTGCTCCAAATAACACTACAGATTTAAAATACTTATCTCAATACATAGCTGGTTCTACACTAGCAAACTGGACTCCAGCTAGCATTACAACAGGGTTATGGTTAGATGCGGCAGATAGCTCTACATTTTCACTATCTAGTGGTACTGTGACGCAATGGAATGATAAATCAGGTAATAATCGTAATGCTGCCCAATCTAATAGTAGCTATAAGCCCACTTTAGTAACTAATATACTTAATTCTAAACCTGTTGTTAGATTTGATGGTTCTAACGACACTTTACAAGTACCCACTTTACCCACAAACGCAAATACTACATATTTTGTAGTTTGCAAAACAAACACGGATGGAAAATATATATTTGGTCATTCTCCTGATGGTTATACAACTGAGATACGACTTTTTAGTGATGGTAGTTTTGTAGGCTACTGGGGAGGTAATTATAAATTTAATATCGCATCTAATGTATTTAGAACTGCGTATTCTATAGGTGTCTTAAATATAGAATCGACTAATACTTCTGTTTATACAAATGGTAATTTTATAAGTACTTCCGCTACATATACAACTGTAAGTCCTACAACATTTCCTCCTTTTGATATAGGGAGTTACAGACTTTCCCCTTCTTTTATGAATGGAGATATAGCCGAAATTATAGTTGTATACGGGACTATGCTTCTTGGAGATATTCAGAAAATAGAGGGGTATTTAGCTTATAAGTGGGGTCTTCAGTCCAATTTACCTAGCGACCATCCTTATAAGACTGTCCAGCCCACAACTGGTGACTCAGGCTCTTTAACTACCGCTTGGAAAACAGTTAATTCTCCTATTGTAACTACAAGTATAAAAACCGCTAATTATAATGCTTTTGCTTATGAAAGAATACCTTGTAATACTAGCGAAAGTAGCTTTTCTATTACTTTACCTAGCACTGGCTCTATTTTAATATATGATGCCATAGCTACCACATTATCTAACGGGTTTGGGGTAAATTCTCTAACTATATTACCTAATTCTGGGGATACTATAATGGGGTCTTCTTCTTTAGTATTATCTACAGGAGGTACTTCGATAGAGTTAGAGAAAATCGGCACAGATTGGAGAATTATATCTAAATTTACACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9ed4ccea7797c4f70a0dd9f2e1b63938d6c9230d9b763c31b52ad691c2020ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7721
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank