Protein

View in Explore
Genbank accession
AZV00349.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MLKILLLAVAALAVAGPAHAAPVTAALAWVGAALKAATVGAALLRMGIGIGLNLLASVLLKPEKPKVNVQFEVDMGDDTPLSFIVGEYPTAGKRKYIGSWGKNTRYITEVIEISCLPVTGLKAVWFNDELGDIRYGQPAMQSGHLMGYPVKNFSEGVGSGDERDRCWIKLIDGTQSTADAFLISIFGTDPDYPWTSAMIGTGKAYAVLSYYYDPEVMTQIPQVLLQPQPLPLYDPRKDSSTGGLGAHRWGDRSTYEPSTNPAVIAYNISRGIYFASEWVFGGRNLPAWRLPRAEWVAAMNACDRPVNLAGGGTEPAFRCGLQITVDMTPADALEEIGRAANMRFAEVGGMLKPVVGLPGAAVLGITDGDILITEGQSFKPFNSLGETFNALSATYPEPREKWSTKDAPEYIDADSTAEDGGRYLPTSVAYPAAPFARQVQRLMRAQMRDYRRARVHQVSLPPDAYALEPLVDMISWSSQRNGYINKQFVVEEVAKTPGLNVLVTLREVDPSDYDWDSDFELPVSIVTPVPVRPFTQVISGFSASAVMLTDNATKARQSAIRVACSGDEVGVTHIQIRVWRNGAADHFVDVLRPFSEPFVWFVQTVQQRTTYQVAARLISDLTPKSTWTAKHTVTTGAVYIDGGDFVDGVTGLFSSAGLKATRIIANRSTPGNSMNELAWSVADSRLYRWNGTEWIHFIEESVKGILDETAFATSIRIPKLVTALPTSGQRVGDMVILQSDPTKIYTWAGGQWKAEIAADQIVGKLTAVQIGAGAIGTEQLAAGAAVISKLAITDWANLVGDDQIQDIAAWTGNVSDTWVALLPNFGVGAPIAQSKGAFQVTPRPGGGQTDMVSLPSPAKPGEEFFASCRVGATHQPISAQLFVQYLDASGNGVGNTPGPVKTTLAWETIEMSSVAPANTAFVRNIMRVNTGGYASGNISFSAPVLRRKGTGKLVVDGTIQGRHIEFETLTGGLMAAAGIITKAAQIDNAVIGRAHIGLLAVDTARIANLTVSTLKVADGAITAQYAAEVANFTVTMPDTSGLQDVLSLTFTLTQSCIILLGWSYEAVNSAASGTVNGRVFLNATEMEFSRAQGSAGNPGNSARVLAKSLGAGTHTLKLRANYSGSDQNKAIRNASIFLWRAYK
Physico‐chemical
properties
protein length:1143 AA
molecular weight: 122407,76760 Da
isoelectric point:5,97198
aromaticity:0,08486
hydropathy:0,00411

Domains

Domains [InterPro]
DC_1181
STR
1–694
DC_1181 DC_0140
IPR032876
ATT
327–477
IPR032876
AZV00349.1
1 1143
Architecture
STR
ATT
STR
STR
STR 1-326 | ATT 327-477 | STR 478-694 | STR 869-1137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZV00349.1
1 1143
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,7900
Central domain 128 326 200 0,2370
C-terminal 327 1143 816 0,3301
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-326
C-terminal
327-1143

Taxonomy

  Name Taxonomy ID Lineage
Phage Paracoccus phage vB_PsuS_Psul1
[NCBI] 		2500569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Paracoccus sulfuroxidans
[NCBI] 		384678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV00349.1 [NCBI]
Genbank nucleotide accession
MK291443.1 [NCBI]
CDS location
range 25365 -> 28796
strand +
CDS
ATGCTGAAAATCCTTCTTCTTGCGGTGGCCGCGCTCGCGGTCGCCGGGCCTGCGCATGCCGCGCCGGTCACCGCCGCTTTGGCCTGGGTGGGTGCTGCCCTGAAGGCCGCGACTGTTGGCGCCGCGCTTTTGCGCATGGGCATTGGGATCGGCCTGAATCTGCTCGCGTCCGTGCTGTTGAAGCCGGAAAAGCCCAAGGTGAACGTTCAGTTCGAAGTGGACATGGGTGATGACACGCCTCTGTCGTTCATCGTGGGCGAGTACCCAACCGCAGGCAAGCGCAAGTACATCGGCAGCTGGGGCAAGAACACCCGCTATATCACCGAGGTCATCGAGATCTCATGCCTGCCTGTCACTGGCCTCAAGGCTGTCTGGTTCAACGACGAGCTGGGCGACATCCGCTATGGCCAACCTGCGATGCAGAGCGGCCATCTGATGGGCTACCCGGTCAAGAACTTCTCCGAAGGTGTCGGCTCCGGTGATGAGCGTGACCGGTGCTGGATCAAGCTGATCGACGGCACGCAATCGACTGCGGATGCTTTCCTGATCAGCATCTTCGGCACAGACCCGGACTATCCCTGGACCAGCGCCATGATTGGCACGGGCAAGGCCTATGCCGTGCTGAGCTATTACTATGACCCCGAGGTGATGACCCAGATCCCGCAGGTGCTGCTGCAGCCGCAGCCCCTGCCGCTCTATGACCCAAGGAAGGACAGCTCGACGGGCGGCCTTGGGGCACATCGCTGGGGGGATCGATCGACGTATGAACCCAGCACCAATCCTGCGGTGATCGCGTACAATATCTCACGCGGCATCTATTTCGCATCGGAATGGGTCTTTGGCGGGCGCAATCTTCCCGCGTGGCGTTTGCCACGCGCCGAATGGGTTGCGGCGATGAATGCCTGTGACCGGCCGGTCAATCTCGCGGGCGGCGGGACCGAACCGGCCTTTCGCTGCGGCCTGCAGATCACCGTCGACATGACGCCCGCCGATGCGTTGGAGGAAATCGGGCGGGCGGCCAACATGCGGTTTGCCGAGGTTGGCGGGATGCTCAAGCCGGTTGTCGGCCTGCCAGGGGCGGCGGTGCTGGGCATCACCGATGGCGATATCCTCATCACCGAGGGGCAGAGCTTCAAGCCGTTCAACAGCCTCGGAGAGACCTTCAACGCCTTGTCGGCGACCTATCCCGAGCCGCGTGAGAAGTGGTCGACCAAGGACGCGCCGGAATACATCGACGCGGATTCGACGGCAGAGGACGGCGGGCGCTATCTTCCGACCTCGGTGGCCTATCCCGCAGCACCATTCGCGCGGCAGGTGCAGCGCCTGATGCGCGCGCAGATGCGGGACTATCGCCGTGCCCGTGTCCATCAGGTCTCCCTGCCGCCCGACGCCTATGCGCTGGAGCCTCTGGTCGACATGATCAGCTGGTCAAGCCAGCGCAACGGCTACATCAACAAGCAGTTCGTGGTCGAGGAAGTCGCCAAGACCCCCGGCCTGAATGTGCTGGTGACACTGCGCGAGGTCGATCCGAGCGACTACGACTGGGACAGTGACTTCGAGCTGCCCGTCTCCATTGTGACCCCGGTGCCGGTCAGGCCCTTCACGCAGGTGATTTCCGGGTTCTCGGCCAGCGCGGTCATGCTGACCGACAATGCGACCAAGGCCCGCCAGTCCGCAATCCGTGTGGCTTGTTCTGGCGATGAGGTCGGGGTCACGCATATCCAGATCCGGGTCTGGCGCAATGGCGCGGCCGACCATTTCGTCGATGTGCTGCGCCCCTTCAGTGAGCCGTTCGTCTGGTTTGTGCAGACCGTCCAGCAGCGGACGACCTATCAGGTTGCGGCGAGGTTGATCTCGGATCTGACGCCCAAATCCACCTGGACGGCAAAGCATACCGTCACGACCGGCGCGGTCTATATTGACGGCGGCGATTTCGTGGATGGCGTCACAGGCCTGTTCTCCAGCGCCGGTCTGAAGGCAACCCGGATCATTGCGAACCGCTCGACGCCAGGAAACTCGATGAACGAGCTGGCATGGAGCGTCGCGGATTCACGCCTCTATCGCTGGAATGGCACGGAATGGATTCACTTCATCGAGGAAAGCGTGAAAGGCATCCTCGACGAGACCGCATTCGCCACCTCGATCCGCATTCCCAAACTGGTCACAGCATTGCCGACCAGCGGCCAGCGCGTCGGGGATATGGTCATCCTCCAAAGTGATCCAACCAAGATCTACACGTGGGCAGGAGGCCAGTGGAAAGCCGAGATCGCGGCAGACCAGATCGTGGGCAAGCTGACGGCGGTGCAGATCGGTGCCGGGGCCATCGGTACGGAGCAGCTCGCAGCAGGCGCAGCCGTGATTTCCAAGCTGGCGATCACCGATTGGGCAAACCTTGTCGGGGACGACCAGATACAGGATATCGCCGCCTGGACGGGGAATGTCAGCGACACGTGGGTCGCGCTGCTGCCAAACTTCGGCGTGGGCGCACCCATTGCCCAGAGCAAGGGGGCGTTTCAGGTCACCCCGCGACCCGGCGGCGGGCAGACGGATATGGTCAGCCTCCCGTCACCGGCCAAACCCGGCGAGGAGTTCTTTGCATCCTGCCGGGTCGGAGCCACACATCAGCCGATCTCGGCGCAGCTGTTCGTTCAGTATCTGGATGCCAGCGGCAATGGGGTCGGGAATACGCCGGGTCCTGTCAAAACCACGCTTGCGTGGGAGACGATAGAAATGTCCAGCGTCGCTCCCGCGAACACGGCTTTCGTGCGCAATATCATGCGCGTGAACACCGGCGGCTATGCCAGCGGTAATATCTCATTCTCTGCGCCGGTTCTGCGGCGCAAAGGGACGGGCAAGCTGGTTGTCGACGGCACCATTCAGGGGCGACATATCGAGTTCGAGACGCTGACAGGCGGTCTGATGGCGGCTGCGGGGATCATCACCAAGGCCGCCCAGATCGACAATGCAGTGATTGGTCGGGCGCATATCGGCCTGCTGGCTGTGGACACCGCGAGGATTGCCAACCTCACGGTGTCCACGCTCAAAGTCGCGGACGGCGCGATCACGGCGCAATATGCGGCTGAGGTCGCCAACTTCACCGTGACGATGCCGGACACCAGCGGGCTGCAGGATGTCCTATCCTTGACCTTCACGCTCACCCAGTCCTGCATCATCCTGCTGGGCTGGTCCTATGAGGCCGTGAACAGCGCCGCCTCGGGCACCGTCAACGGGCGGGTTTTCCTGAATGCGACCGAGATGGAGTTCTCACGCGCGCAGGGAAGCGCAGGTAATCCCGGCAACTCGGCCCGCGTCCTTGCGAAATCCCTGGGCGCGGGCACGCACACCCTCAAGCTCAGGGCTAACTATTCCGGTAGCGACCAGAACAAGGCGATCCGGAACGCGTCCATCTTCCTTTGGAGGGCTTACAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
46ac26a0186881810309b6098848bd95f8e5357af23b10c13f91895864e804ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7533
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Insight into the virome of Paracoccus spp. (Alphaproteobacteria) Decewicz,P., Dziewit,L., Golec,P., Kozlowska,P., Bartosik,D. and Radlinska,M. 2019-05-27 — GenBank