Protein

View in Explore
Genbank accession
QFP93639.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSVQIAVSDGTLSRIALSIEYFEQDDITLYRNLSTTPLVLGTDWQWDGATHINLLTDSPVPAGSYITVRRNTNIDRAFNIYDGGAAFTRDTLDENFKQMIYLAQEFTEGNGLTGLFFPLNMRGFKITDLGAGESVGDAVNKGQLDAVATRVDSLEDTFVGSTVSYPWYVTTTASTDTIEPPYVFTKAALFLNGVCQTPGYSYLVVDNTIMLADPVPVGTHVFVRIGEDVGLDTSYATTDQLANAILDAEGEHSSMRAEWQADDAVVQADVSTRARAGVNSDITSLTGLTTALSTEQGGTGNTVGTVARLTTPRTLSVDLTSTATPSFDGTTDVVQGVLGVLPVSKGGTGASTASLARTALGSTSIGDAVFVASNAASARSTLSAAVMGSNNDITALTNLSGGITGLTTGVAASSGIVGEVASAASGSATNLVSGSAINIISLSLPAGDWELESAFQIINTGNVTSLAFGVSTTTGVLPTTWYDVYSITTTIGAGTSNRQGMARRVLLSTTTTVYLVAQATFTGTATANGYVRARRVR
Physico‐chemical
properties
protein length:538 AA
molecular weight: 55996,58990 Da
isoelectric point:4,42704
aromaticity:0,07249
hydropathy:0,11338

Domains

Domains [InterPro]
DC_1894
ATT
1–150
DC_1894
IPR005604
ATT
3–108
IPR005604 DC_1547
QFP93639.1
1 538
Architecture
ATT
STR
ATT 1-150 | STR 151-538
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage CX5-1
[NCBI] 		2652427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium atrosepticum
[NCBI] 		29471 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93639.1 [NCBI]
Genbank nucleotide accession
MN270888.1 [NCBI]
CDS location
range 24924 -> 26540
strand +
CDS
ATGTATTCAGTACAGATTGCTGTATCAGATGGCACTCTATCGAGGATTGCTCTGAGCATTGAGTACTTCGAGCAAGACGATATCACGCTGTACCGTAATCTGTCCACTACCCCACTGGTACTCGGTACAGACTGGCAATGGGATGGGGCTACCCATATTAACCTGTTAACAGACTCCCCTGTACCAGCGGGGAGTTACATCACGGTACGTCGTAACACAAACATTGATAGGGCGTTTAATATTTATGACGGGGGGGCTGCGTTTACCCGCGACACACTGGACGAAAACTTTAAACAGATGATTTACTTGGCGCAGGAGTTTACAGAGGGGAATGGTCTTACCGGACTGTTCTTCCCTCTGAATATGCGCGGGTTTAAAATCACTGATTTAGGCGCGGGTGAGTCTGTGGGGGATGCGGTTAATAAAGGACAGTTGGATGCTGTGGCTACCCGCGTAGACTCTTTAGAGGATACCTTTGTTGGTAGTACTGTCAGTTATCCGTGGTACGTAACCACCACCGCTAGTACAGACACAATAGAACCACCATACGTGTTTACAAAGGCCGCGCTATTTCTGAATGGTGTATGCCAGACACCGGGCTACAGTTATCTTGTAGTAGATAATACTATTATGTTAGCCGACCCTGTACCTGTAGGCACGCATGTGTTTGTACGTATAGGTGAGGATGTTGGTCTGGATACCAGTTATGCTACTACAGACCAGCTTGCTAATGCTATCCTAGATGCGGAGGGCGAGCACAGTAGTATGCGTGCTGAGTGGCAGGCTGATGATGCTGTAGTACAGGCAGATGTATCTACAAGGGCGCGCGCCGGCGTTAACTCCGATATCACGAGTTTAACAGGGTTAACTACAGCCCTCAGTACCGAACAAGGCGGTACAGGCAATACAGTAGGTACTGTAGCTCGTTTAACTACGCCACGTACACTAAGTGTAGACTTGACCAGTACTGCTACTCCTTCCTTCGACGGTACTACTGACGTGGTTCAAGGGGTACTTGGTGTACTACCTGTATCCAAAGGTGGTACAGGTGCAAGCACTGCGTCCCTCGCTCGTACTGCTCTAGGTAGTACATCTATAGGTGATGCGGTATTTGTAGCAAGTAACGCTGCCTCTGCACGTAGTACTTTGTCGGCAGCTGTTATGGGTAGTAACAATGACATCACCGCCCTTACTAACCTATCAGGGGGTATAACGGGTCTAACTACAGGTGTAGCTGCAAGTTCAGGTATTGTTGGGGAGGTGGCTTCTGCTGCGTCTGGTTCCGCTACTAATCTTGTATCCGGGAGTGCTATTAATATTATTAGCCTTAGTTTGCCCGCAGGTGATTGGGAGCTGGAAAGTGCTTTCCAAATTATAAACACGGGTAACGTGACTTCCTTAGCCTTTGGTGTTAGTACCACCACAGGTGTACTACCCACTACGTGGTATGATGTGTACAGCATTACGACTACCATCGGTGCAGGGACTTCGAACAGGCAGGGTATGGCAAGGCGCGTACTACTGAGTACCACCACCACTGTGTACCTTGTAGCACAGGCGACCTTTACAGGTACAGCTACCGCTAATGGGTACGTACGTGCCCGGCGAGTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c477d0d77d4b0d4152ee2ad4a2aeabe1c10a884b6764c4a0d9035e5570872822
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Six bacteriophages against potato bacterial diseases Zhang,X. and Kering,K. 2022-08-30 — GenBank