Protein

View in Explore
Genbank accession
QIG65228.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,71
Protein sequence
MSCKYDIIDEDGRKRVRALRHFTVQGRDVCPMELGGYVYDANTLSQDGNCWIFSGSLEYPGVRVMDEAIVDMGNNLPEDNARPKNVIISGNSRIMGAISFKTGVSAVVQTPAMFEQGGYTATVGMTPVKASDGSRIRIAAALFGGSVGKVAVTSASYEARIISLDSDGLVMGGGTWTAGGPAVTLTTTSPYFLVEVRKTPIGAAITPADVTAAGITITLAREATVRIFNSSLVPVYNGSVTAASNILRYEVTDASGKPYQVNIQNSYLRIECSFNMQNTVRANADFIKVNYNLVLTPNVPHYIVGTYRNTNINTPASVGVAGYGKNRFDVSDCPDFEFSSVVFPDLTAMYASGKTFYFKQCNMPVGSALHYYDPKVNVWDNIDFTKAMADLGKEAFVGTTIISSNVQGMYRAKGNASGTIGGLLEAASSFDNAVYDGTAGATYDCITYKDCVVKGKFTLRGRCVFGGTPGGASRITNTQATAMVVDGNFRIDGNAQVTDTSLRGTGYIGGNAELKNGSVEGYIYMDGNAKYIPAVVANPPIIRRLIMSGNAKVLKQRDAASGVMNLVMSDNAVLDAAIGFVGEMIMRDDSRIVRADANSAATVYGKLVLKDRARVEGTASVDIRGEITLVGNFAASGARTITGKRTISDVSEITAVELPMTKKTW
Physico‐chemical
properties
protein length:665 AA
molecular weight: 70890,68140 Da
isoelectric point:8,19421
aromaticity:0,08271
hydropathy:-0,02105

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG65228.1
1 665
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0208
Central domain 11 654 645 0,9565
C-terminal 655 665 10 0,2533
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-654
C-terminal
655-665

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC15
[NCBI] 		2710512 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65228.1 [NCBI]
Genbank nucleotide accession
MT074153 [NCBI]
CDS location
range 2477 -> 4474
strand +
CDS
ATGAGTTGTAAGTATGACATTATTGACGAAGACGGGCGTAAACGCGTAAGAGCGTTGCGCCACTTCACGGTACAAGGGCGGGACGTTTGCCCTATGGAGCTAGGCGGATACGTCTACGATGCTAATACGCTGTCACAGGACGGTAACTGTTGGATATTCAGTGGAAGCCTAGAATACCCCGGTGTACGTGTTATGGATGAGGCTATCGTGGATATGGGTAACAATCTACCAGAGGACAACGCTAGGCCAAAGAACGTTATCATTTCCGGTAATTCCCGTATCATGGGAGCTATCTCGTTTAAAACGGGCGTATCTGCGGTAGTGCAGACCCCTGCGATGTTTGAACAAGGAGGGTACACTGCCACCGTGGGAATGACACCCGTTAAGGCTTCTGACGGTTCGCGAATCCGAATCGCTGCCGCCCTGTTTGGGGGGTCTGTGGGAAAGGTAGCCGTTACGAGCGCATCGTACGAGGCGAGAATAATCTCTCTTGACTCGGACGGGCTTGTAATGGGTGGGGGAACTTGGACCGCAGGGGGTCCCGCGGTTACCCTTACAACGACATCACCCTATTTCTTGGTAGAGGTGAGAAAGACCCCTATTGGCGCCGCTATCACCCCGGCGGACGTAACCGCAGCGGGTATCACGATAACACTGGCAAGGGAAGCCACGGTACGCATATTCAATTCTTCCCTTGTCCCGGTGTATAATGGTTCGGTGACCGCAGCATCTAATATCCTACGTTACGAGGTTACCGACGCTAGCGGAAAACCGTATCAAGTAAATATTCAAAATTCGTACCTACGTATCGAGTGTAGCTTTAATATGCAAAACACAGTGAGAGCGAATGCGGACTTTATAAAGGTGAATTATAACCTAGTATTGACGCCGAACGTGCCCCACTATATCGTAGGAACCTACCGTAACACGAACATCAATACCCCGGCTAGCGTAGGCGTAGCGGGATACGGTAAAAATAGATTCGATGTATCCGATTGCCCGGACTTTGAGTTTTCGTCCGTGGTGTTCCCCGACCTAACTGCTATGTATGCATCCGGCAAGACGTTCTACTTTAAGCAGTGTAACATGCCCGTAGGTTCAGCGCTCCATTACTACGACCCGAAAGTGAACGTGTGGGATAACATCGACTTCACTAAGGCTATGGCGGACTTAGGGAAAGAGGCGTTCGTAGGTACTACTATCATATCATCCAATGTACAGGGGATGTACCGTGCCAAGGGAAATGCTAGCGGCACAATCGGAGGTCTGCTAGAGGCGGCGTCCAGTTTCGACAACGCGGTCTATGACGGCACGGCGGGTGCGACCTATGATTGTATCACCTACAAGGATTGCGTTGTCAAAGGTAAATTCACGCTCAGAGGCCGCTGCGTATTTGGCGGTACACCGGGCGGCGCATCCCGGATTACCAACACACAGGCAACGGCGATGGTGGTTGACGGAAATTTCCGGATCGATGGGAACGCGCAGGTAACCGATACGTCTCTCAGAGGTACAGGCTACATCGGCGGCAATGCCGAGCTGAAGAATGGAAGCGTAGAGGGATACATTTATATGGACGGGAACGCCAAGTACATTCCCGCCGTTGTGGCGAATCCTCCGATTATTAGAAGATTGATTATGTCCGGAAATGCGAAAGTACTGAAACAACGGGACGCGGCATCGGGAGTAATGAACCTAGTTATGTCGGATAATGCGGTATTAGATGCCGCTATCGGATTCGTGGGAGAAATGATAATGCGGGACGATTCCCGAATCGTGCGTGCAGATGCGAATAGTGCAGCCACCGTCTACGGGAAACTTGTATTGAAAGACCGTGCACGGGTAGAAGGAACTGCGTCGGTAGACATAAGAGGGGAAATAACCTTAGTAGGAAACTTCGCTGCATCCGGTGCAAGAACCATCACAGGTAAGCGAACTATTTCAGACGTCTCAGAGATCACAGCAGTAGAATTACCTATGACCAAAAAGACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a93ffd4a7fcd0a016d904468e390208331982dc3330dc918f1339b9b12e04c9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4746
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank