Protein

View in Explore
Genbank accession
AOO16163.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTIRVDQLRALSDNNFSINVSPNDNFEIQGTIEFDSGASFAVPVGTSAQRPTSPVGGMLRYNSELDRLEFYDGTTWQIFIGGSGAPNGLTEATAVTSVQALYDAGQVTDGSYWINFDGTARQYFVPLNSHPYYILVGNWGGGADKFLQNASALSGNQLNNNGDNTPTGNWANNGTYGYYRNTGGSDFKYATMDARGIQYRYVKMKFNLYNYHSNDGVTARNFLGISSNVGDGVTIMRDNSSEGDSQHIFTYYSAISNNDSNGCPSATPTFPSHVRVGTNPGAFMGTRFCCFSREGSSYTTEYVRNFTPYAGDSSGGTAPNAFTGDAWYEMDLGINNPHNLHCVIHSDQDSSNEDTYIKRGVVLVRPA
Physico‐chemical
properties
protein length:368 AA
molecular weight: 40086,16050 Da
isoelectric point:4,90739
aromaticity:0,12500
hydropathy:-0,49592

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO16163.1
1 368
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,4706
Central domain 81 279 200 0,0059
C-terminal 280 368 88 0,9967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-279
C-terminal
280-368

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12_RW_04_0709
[NCBI] 		2928615 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO16163.1 [NCBI]
Genbank nucleotide accession
KX349312 [NCBI]
CDS location
range 28451 -> 29557
strand +
CDS
ATGAGCACTATTAGAGTAGACCAACTTAGAGCATTATCAGATAATAATTTTTCTATTAATGTAAGTCCTAATGATAACTTTGAAATTCAAGGAACTATTGAGTTTGACTCTGGTGCATCCTTTGCAGTGCCTGTAGGAACGAGTGCTCAAAGACCAACATCACCTGTAGGAGGTATGCTGAGATATAATAGTGAACTCGATCGTCTTGAGTTTTATGATGGAACTACTTGGCAAATCTTTATTGGTGGTAGTGGAGCACCAAACGGATTAACAGAAGCAACCGCAGTTACTTCAGTGCAAGCATTATATGATGCTGGACAAGTAACAGACGGATCATATTGGATTAACTTTGATGGTACTGCTAGGCAATATTTTGTGCCATTGAATAGTCATCCATATTATATTCTGGTAGGTAACTGGGGTGGTGGTGCTGATAAGTTTTTGCAAAATGCTAGTGCATTAAGTGGCAATCAACTTAATAATAATGGTGATAACACTCCTACGGGAAACTGGGCAAACAATGGTACTTATGGATATTATAGAAATACTGGTGGAAGTGACTTTAAGTACGCTACAATGGATGCTAGGGGTATACAATATCGTTATGTGAAGATGAAATTTAATCTTTATAACTATCATTCAAATGATGGTGTTACTGCTAGAAACTTTTTAGGCATTAGTTCTAATGTTGGCGATGGCGTGACCATTATGAGAGATAATAGTTCTGAGGGGGATTCTCAACATATTTTTACATATTATAGTGCTATCTCTAATAATGATAGCAATGGTTGTCCTTCTGCAACTCCAACATTTCCCTCACATGTACGGGTAGGAACTAATCCTGGTGCATTTATGGGTACTAGGTTCTGCTGTTTTTCTAGGGAAGGTAGCAGTTATACTACAGAATATGTTAGAAACTTTACTCCATACGCTGGAGATAGTAGTGGTGGCACTGCACCTAACGCCTTTACTGGTGATGCTTGGTATGAAATGGACTTAGGTATAAACAATCCTCATAATTTACATTGTGTCATTCATTCCGATCAAGATAGTAGTAATGAGGACACCTATATAAAACGAGGAGTTGTGCTCGTTCGTCCTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c06e9963162818ae7a6dba38e31d28c64cf9290aecb80e2287931321eb4566e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4355
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50