Protein

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Genbank accession
YP_009600041.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNLRQKSNYRIQKFIAGSSHIAVLGTNGQLYTRGNNQYGQLGDTTYSTDYNNWVLSMSNVSSIYGDRSENTIAIKNDGTVWVCGRFTSAVQFGFSSTVGANSWVEITSSIPFSVSLIKDIIVGYQMSAILRSDGLVYFCGTNSYGQFGRNNTTNLSVYTVSLATDVQKLYVQHPVGSVQNVISYLDSSSHIWACGYNGYKQVSFSNTSSFSTFQQMSTTIVCSAVAIAGRTSWYLDSSNNVGLFCGNAVDLQGSNSGILNLYSATGNQSSGLTDFQLASSGGVVYGRKSTGQFFAKILFGGGGSVTPLMNNVSNRANWLQQHTLPVSTATYSGMAMGNNNNAFLLYLGADYQEIWGLGLMFPQNDSVYRPLVIPDFN
Physico‐chemical
properties
protein length:384 AA
molecular weight: 41648,04950 Da
isoelectric point:8,17893
aromaticity:0,12240
hydropathy:-0,04271

Domains

Domains [InterPro]
IPR009091
STR
3–241
IPR009091 DC_1531
IPR009091
STR
3–250
IPR009091
IPR009091
STR
13–262
IPR009091
IPR051553
Unmapped
17–215
IPR051553
IPR000408
STR
21–37
IPR000408 IPR000408 IPR000408
PF13540
STR
23–47
PF13540
YP_009600041.1
1 384
Architecture
STR
RBD
STR 3-262 | RBD 263-384
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009600041.1
1 384
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,0449
Central domain 288 373 87 0,5086
C-terminal 374 384 10 0,4580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-373
C-terminal
374-384

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage BF
[NCBI] 		1962671 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600041.1 [NCBI]
Genbank nucleotide accession
NC_041917 [NCBI]
CDS location
range 352504 -> 353658
strand -
CDS
ATGTTACCATTTCCAATCATAAGTAATTTACGTCAAAAAAGTAATTACAGAATTCAAAAGTTTATAGCTGGGTCATCCCACATTGCAGTACTTGGAACAAATGGTCAATTATATACTAGAGGCAATAACCAGTACGGACAACTTGGTGATACTACGTACAGTACAGATTATAACAATTGGGTACTTAGTATGTCAAACGTATCATCGATATATGGGGATCGTTCTGAAAATACGATAGCAATTAAAAATGATGGTACAGTATGGGTATGTGGTAGATTTACGTCAGCCGTACAATTTGGGTTCAGTAGTACAGTTGGTGCAAATTCATGGGTAGAAATCACATCTAGCATACCATTTAGCGTATCATTAATCAAGGATATTATTGTTGGGTATCAGATGAGTGCGATTTTACGGTCTGATGGATTAGTATATTTTTGTGGTACAAATTCATATGGTCAGTTCGGTAGAAATAACACAACGAACTTATCTGTTTATACTGTCTCATTAGCCACTGATGTTCAGAAACTATATGTTCAACATCCAGTTGGATCTGTTCAGAATGTTATTTCTTACTTAGATAGTTCTTCACATATATGGGCATGTGGATATAATGGTTATAAGCAGGTTAGTTTTTCTAATACATCATCATTTAGTACTTTTCAACAAATGAGTACAACTATAGTATGTAGTGCAGTGGCGATTGCTGGGAGAACATCTTGGTACTTAGACAGTTCTAATAATGTTGGATTATTTTGTGGTAATGCTGTAGATTTACAGGGATCAAATAGTGGTATATTAAACTTATATAGTGCTACTGGAAATCAAAGTTCAGGTCTAACTGATTTTCAATTAGCATCAAGTGGAGGAGTTGTTTATGGAAGAAAGAGTACTGGTCAATTCTTTGCTAAGATATTATTTGGTGGCGGGGGTTCGGTAACACCATTAATGAACAATGTATCTAACCGAGCTAATTGGTTACAACAACATACATTACCAGTCAGTACTGCGACATATTCAGGAATGGCAATGGGAAATAACAATAATGCATTCTTATTGTACTTAGGTGCAGATTATCAAGAGATATGGGGTTTAGGATTAATGTTCCCACAAAATGATAGTGTTTATAGGCCATTAGTAATACCAGATTTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f17dd1917929ac340c70edfc6ab84e5090bcc3e4444c9c8a2cf59732a872152
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Serratia marcescens phage BF Casey,E., Fitzgerald,B., Mahony,J., Lugli,G., Ventura,M. and van Sinderen,D. — — GenBank