Protein

View in Explore
Genbank accession
UGL60997.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAIGDEDEYEDDPCSQYTFTFYVPDSADPVYVQELILMPPPTNLPWDEEAMNKITQAVVDARNARDDAAESADRAEAQVGLAAAQVTLAKAEVTKATAQADRSKAEADRATTQATNAANSATAAANSATQANTQANRAKTEADRSKSEADRARDLADAMAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGSVMRLTKTDGSGSRAFLRQAVTFPDSHWIVYMRVKTQTGTAAQNRSAQIRFIAADNKDCVVYFNVNVNGIVEPNTIHMQGTEGSSRNAATMFTGLNTESWMDLAVKYDAVNRHIELFRRMPNGTWQKGGGRLMVDAIKPAFIEVSSMPVAPLNWWLDLDFISVCKPNLICYGDSIAAGQNEYGVTRGSNSYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFIHASTNDVNDATMTMEKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASTTTVKLRDYTDQWWNTELPKVNGLAQTLDIARLIAKDGYMDPALGASDGLHLTDASAQKIADKLGQFFSNSSDTNGFASLDSPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLSMRSRTGSQMEAGGVRSGYYYVPGDSSNPLPGNVYAFVHHMSYDTNKGWELWNHCYTDRVYMRYSNNAGVWQTPVEVVTEKWMERNSFMTPRVSAFNRLPVASSAGFEGVVPLQTNSSGAWRNVNAGVAGLGLLGATTAGNALNYIGGMPKAPTNDRANSNLNNLPDECGFYGLGPAPYSNIPPGVDAINPVGSTVYHQVYDANTATQIFIPRTSDICYFRRKAGGTWSPWVRYLTDLQLVGTTTDSSAGVPNGAIMQINGSAAVNVGVALRFADGTQIVRALLQLDYGAVDLLQRQFTFPMAFVGKPVVTATLEQGTVADINNMPLQALGPVMVARIYAGNCNVRVMRSQGYTAGGFAAGSKMLCSVIAMGFWK
Physico‐chemical
properties
protein length:1065 AA
molecular weight: 115761,22030 Da
isoelectric point:5,27292
aromaticity:0,09296
hydropathy:-0,28901

Domains

Domains [InterPro]
DC_0123
ATT
1–154
DC_0123 Coil Coil IPR036514 DC_0857
DC_1375
STR
116–748
DC_1375 cd19958
Coil
Unmapped
125–145
Coil IPR051532
SSF52266
STR
432–630
SSF52266
cd00229
ENZ
435–631
cd00229
IPR013830
ENZ
437–620
IPR013830
UGL60997.1
1 1065
Architecture
ATT
STR
ATT 1-154 | STR 155-1065
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60997.1
1 1065
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,9744
Central domain 235 481 248 0,5534
C-terminal 482 1065 583 0,7841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-481
C-terminal
482-1065

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_TUMS_P81
[NCBI] 		2900128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60997.1 [NCBI]
Genbank nucleotide accession
OL519844.1 [NCBI]
CDS location
range 39791 -> 42988
strand +
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGTAGCCCACAGGCGAACGAGAAGTTCACCGTGCGACTTACCCGTCCTGGCATGAGCGATGCAGAGCACTGCGTCGTAATTCCCGAAACCTACGAGATGGTGACCGACGCCAAGGGCGAGTTCACCATGGACCTGGAATCGTCCACCTCTGCCTACCGCGTCACTGCTATAGGCGATGAAGACGAGTACGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTGCCGGACTCTGCTGATCCGGTCTACGTGCAGGAACTGATCCTGATGCCCCCGCCCACGAATCTTCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAGGCGGTGGTCGATGCTCGCAACGCACGAGACGATGCCGCAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCTGCTGCGCAAGTGACCCTTGCAAAGGCAGAGGTGACCAAGGCTACCGCCCAGGCTGACCGCTCCAAGGCGGAAGCTGACCGTGCCACTACCCAGGCCACGAACGCAGCCAACTCGGCTACTGCTGCGGCGAACTCTGCCACCCAGGCCAACACTCAAGCCAACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGTGAGGCTGACCGTGCACGGGATCTGGCTGATGCCATGGCTGAGAAGGTCGAGGGTGGCTCCCTGCCCCCGCTTGTGGGCATGAACGAAACCTTCACCTACGAAGGTACCGACCCGTACCGCTGGACCGTCTCCGGTCCTGCTACGGCTGTATCGGACGGTAGCGTCATGCGTCTCACCAAGACCGATGGCAGCGGCTCTCGTGCTTTCCTGCGGCAGGCAGTGACCTTCCCGGACAGTCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCTGCTCAGAATCGATCTGCACAGATCCGCTTCATCGCTGCTGACAACAAGGACTGCGTGGTCTACTTCAACGTCAACGTGAACGGTATTGTCGAACCCAACACCATCCACATGCAGGGCACCGAGGGTAGTTCCCGTAACGCTGCCACCATGTTCACTGGTTTGAATACCGAGTCCTGGATGGATCTCGCTGTGAAGTACGATGCAGTCAACCGCCACATCGAACTTTTCCGCCGTATGCCCAATGGCACCTGGCAGAAGGGTGGCGGTCGTCTGATGGTTGATGCTATCAAGCCGGCCTTCATCGAAGTCTCGTCCATGCCGGTAGCACCTCTGAACTGGTGGCTGGATCTGGACTTCATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGACAGCATCGCCGCAGGCCAGAACGAGTACGGTGTGACTCGCGGGAGTAACTCCTACAACAACAATCGCAACTGGGCTGGTACTTGGTTTGGTAAGGTTCCGCTGTATGCCACGAATCGGAACAACCTCGTGCTTGTGCAGGGTGTGGAAGGTCGCCGTACTTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAACTCTGGCGTCAAGGTAGTCTTCATTCATGCCAGCACGAATGACGTGAACGATGCCACCATGACCATGGAGAAGCGCACCTCTGATACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCCCAGGTGGTGCTGTTCAACTCCATGCAGGGCACGAAGGCGTACAACGATGCTTCGACCACTACCGTCAAGCTTCGGGACTACACTGATCAGTGGTGGAACACTGAACTACCCAAGGTCAATGGTTTGGCCCAGACGCTGGACATTGCTCGACTCATCGCCAAGGACGGGTACATGGACCCTGCCCTCGGTGCGAGTGATGGCCTGCACCTTACCGATGCCTCGGCACAGAAGATCGCCGACAAGCTTGGCCAGTTCTTCTCCAACTCCAGCGATACCAATGGCTTCGCCTCGTTGGATAGCCCAGCCTTCACTGGTATCCCGACTGTCCCCACGCAGACTCCTTTCCTGCCTTACGGCAAGCAGATCGCCAACACCGAGTACGTCATTACCTTCATCCAGGACTGGACCAGTAACTATGGTTACGGTGACCTGTCGATGCGCAGTCGGACCGGTTCCCAAATGGAAGCCGGTGGGGTGCGTAGCGGTTATTACTATGTTCCTGGGGATTCTTCTAACCCCTTGCCGGGGAATGTTTATGCATTCGTGCACCACATGTCCTACGACACCAACAAGGGTTGGGAACTCTGGAACCACTGCTACACCGACCGTGTGTACATGCGTTATTCGAACAACGCAGGTGTATGGCAGACGCCGGTAGAGGTGGTTACTGAGAAGTGGATGGAGCGTAATAGCTTCATGACCCCACGGGTTTCTGCATTCAACCGTCTGCCCGTGGCTTCTTCTGCTGGTTTTGAAGGGGTTGTTCCCTTGCAGACCAACAGTAGTGGGGCTTGGCGTAACGTGAATGCTGGTGTAGCTGGGTTGGGCCTTCTCGGTGCAACTACGGCTGGTAATGCACTGAACTACATTGGTGGTATGCCCAAAGCCCCAACCAATGATCGGGCCAACAGTAACCTCAACAATTTGCCTGATGAGTGTGGTTTCTACGGTTTGGGACCAGCACCGTATTCCAATATCCCTCCGGGGGTTGATGCGATTAACCCAGTGGGTTCTACCGTCTACCATCAGGTTTACGACGCCAACACCGCTACGCAAATCTTCATTCCGCGTACTTCGGACATCTGCTATTTCCGCCGTAAGGCAGGAGGAACCTGGAGTCCATGGGTTCGTTACCTGACTGATTTGCAGCTGGTAGGCACCACTACTGACAGCAGTGCCGGTGTTCCGAATGGTGCCATCATGCAGATCAATGGGAGTGCTGCTGTAAACGTAGGTGTTGCCCTCCGCTTTGCAGACGGTACTCAAATTGTTCGGGCGTTACTCCAATTGGATTACGGTGCAGTAGATCTCCTTCAGCGTCAGTTCACTTTCCCCATGGCTTTTGTGGGTAAGCCGGTGGTAACCGCCACCCTGGAACAAGGTACTGTTGCTGACATCAACAACATGCCTTTGCAGGCTCTTGGCCCTGTTATGGTTGCCCGTATCTATGCAGGCAACTGCAACGTGCGTGTCATGCGGTCTCAGGGGTATACTGCTGGTGGATTCGCAGCAGGCTCTAAAATGCTGTGCTCTGTCATCGCAATGGGGTTCTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b50d794ef7be116335f85774c4a6774795cd9062d1de9639ee7f3a971fa55ab6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of Pseudomonas phage vB_PaeS_TUMS_P81 Kamyab,H., Torkashvand,N., Shahverdi,A.R., Khoshayand,M.R., Sharifzadeh,M. and Sepehrizadeh,Z. 2023-04-25 — GenBank