Protein

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Genbank accession
APC43265.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGAGLYPPPTNTSAPRGVRYYSNIGSTGYVGDTETRAYLASFVAEGSRLYRVTLNLAAVDTDGAGDTTATSHGAKNSATIRARWAYGTDANTGDADLGAFYQTVYDDDSQFGSGAIHQWFIGGLTAGQASVAITIKATKAAATYGSIRILTLGGNSTSLQVEDIGPWPVP
Physico‐chemical
properties
protein length:170 AA
molecular weight: 17652,17520 Da
isoelectric point:5,16879
aromaticity:0,10000
hydropathy:-0,17118

Domains

Domains [InterPro]
IPR055722
STR
1–168
IPR055722
APC43265.1
1 170
Architecture
STR
STR 1-168 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Joe
[NCBI] 		1913034 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces coelicolor
[NCBI] 		1902 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC43265.1 [NCBI]
Genbank nucleotide accession
KX815338.1 [NCBI]
CDS location
range 19790 -> 20302
strand +
CDS
GTGGGAGCTGGGCTGTACCCACCTCCGACCAACACCAGCGCCCCGAGGGGCGTCCGCTACTACTCCAACATCGGTTCAACCGGCTACGTCGGGGACACCGAGACGAGGGCCTACCTCGCGTCGTTCGTCGCCGAGGGCTCCCGCCTGTACCGCGTGACCCTGAACCTCGCTGCCGTCGACACTGACGGTGCTGGCGACACGACTGCGACCAGTCATGGCGCGAAGAACTCGGCGACGATCCGCGCCCGTTGGGCCTACGGCACCGACGCCAACACCGGAGACGCCGACCTCGGCGCCTTCTACCAGACGGTCTACGACGACGACTCGCAGTTCGGTTCAGGCGCGATCCACCAGTGGTTCATCGGTGGGCTGACGGCTGGCCAGGCCAGCGTCGCCATCACCATCAAGGCCACCAAGGCTGCGGCCACCTACGGAAGCATCCGCATCCTCACCCTTGGCGGCAACAGCACATCCCTCCAGGTCGAAGACATCGGCCCCTGGCCCGTCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c653369e437ebfbde43785147c34133954bfdf302f47f23b0e19886b73bb70e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5698
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
DNA sequence of the Streptomyces Phage Joe and characterization of phiJoe genome integration and excision Fogg,P.C.M., Haley,J.A. and Margaret,S.C.M. 2017-03 — GenBank