Protein

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Genbank accession
AKQ07434.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPTIKAPDKFFGSNVVTEFIDSVGTSEITYTFTGEPREEIRLQNLSTATVILTVAGQEVTAEAFSSIKVSDLSVMDFKVKSLLGGASFRLTASYVTEDEEDEIKLEKEISNVRNKQNNKDVVVDYKVEKGVLKNAASLIQKAIDECTPVGLWVVIPKGDYYLEKSLIAKAGLKMIIHKDAKLLRYHNDCMVLNGVPGDMVGQSDIWIDGGQWDCRGHLIADDGSAFAMGYAKNITLRNLKIYNVNFSHGMEICAIDTADIEFCEGYGFIDTGGTRTTAEFIQIERGTPTGFPYFGPGDGTPCKNIYVKRAKIGPSANAPSFNVGVGSHDNIINTGAIGVHIIDCDFSQAVKTGMQLRGLRNTVVERVIAYGEKGVEIGHDNATETNVLIRDSDIKGTLTSGITLDGVTKLVIEHTKIDGYTNGIYGLRSKDIDIDKKCDISGQTSDAVAIITNSSNVSVARCIIRKAGRHAFNIYDNASHYRIKENTVIDVATNVFNLAGSNTKQMHIRENTVLDTTLTNIVNASAGVDKLFFKDNVYPASIATPIVSSATNSTVLAADNITF
Physico‐chemical
properties
protein length:563 AA
molecular weight: 61148,57830 Da
isoelectric point:5,49499
aromaticity:0,07282
hydropathy:-0,11083

Domains

Domains [InterPro]
DC_1325
ATT
1–130
DC_1325 IPR012334 IPR011050
Coil
Unmapped
95–115
Coil IPR011050 IPR006626
IPR012334
STR
134–385
IPR012334 IPR006626
IPR006626
Unmapped
231–254
IPR006626 IPR006626 IPR039448
IPR006626
Unmapped
384–406
IPR006626
AKQ07434.1
1 563
Architecture
ATT
STR
ATT 1-130 | STR 131-550 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKQ07434.1
1 563
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,8739
Central domain 133 552 421 0,9940
C-terminal 553 563 10 0,1779
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-552
C-terminal
553-563

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Pavlov
[NCBI] 		1675598 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus megaterium
[NCBI] 		1404 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKQ07434.1 [NCBI]
Genbank nucleotide accession
KT001911.1 [NCBI]
CDS location
range 11022 -> 12713
strand +
CDS
GTGCCAACAATTAAAGCACCGGATAAATTTTTTGGTAGCAATGTTGTTACTGAATTTATCGACAGCGTGGGAACATCTGAAATAACATACACGTTTACAGGTGAGCCACGCGAAGAAATCAGACTTCAAAACCTCAGTACGGCAACGGTCATTTTGACTGTTGCCGGTCAAGAGGTAACAGCGGAAGCGTTTAGCTCTATAAAAGTTAGTGACTTATCCGTAATGGATTTTAAAGTAAAGTCATTATTGGGCGGTGCTTCATTTCGTTTGACCGCTTCTTATGTTACGGAAGATGAAGAGGACGAAATTAAACTAGAAAAAGAAATCTCTAACGTAAGAAACAAACAGAATAACAAAGATGTTGTTGTTGATTACAAGGTGGAAAAAGGTGTATTAAAAAATGCTGCTTCACTGATTCAAAAAGCAATAGACGAATGCACGCCGGTTGGCTTATGGGTGGTCATTCCTAAAGGTGATTACTATTTAGAAAAGTCATTGATTGCTAAGGCCGGTCTTAAAATGATTATTCATAAAGACGCGAAGCTGCTCCGCTATCATAACGATTGCATGGTTTTAAATGGCGTGCCTGGCGATATGGTAGGGCAAAGTGATATATGGATTGATGGCGGGCAATGGGACTGCAGAGGGCATTTAATTGCAGATGATGGCAGCGCCTTTGCTATGGGGTACGCGAAAAACATTACATTGCGTAACCTTAAAATCTATAATGTTAACTTCTCTCATGGTATGGAAATCTGCGCGATTGATACGGCAGATATTGAGTTTTGCGAAGGGTACGGCTTTATTGACACTGGCGGCACTCGTACAACAGCGGAATTTATACAAATAGAACGCGGAACGCCTACCGGTTTCCCTTACTTTGGACCGGGTGACGGTACACCATGTAAAAACATTTACGTTAAGCGGGCAAAGATTGGACCTAGTGCCAATGCTCCTTCTTTCAATGTTGGAGTTGGTTCTCATGACAACATCATAAACACTGGCGCTATCGGCGTTCATATTATTGATTGTGATTTTTCGCAAGCAGTTAAAACAGGAATGCAGCTAAGAGGACTTAGAAACACAGTTGTTGAGCGTGTAATTGCATACGGTGAGAAAGGCGTAGAGATTGGACACGATAACGCAACAGAAACTAATGTCCTTATTCGTGACAGTGATATAAAAGGCACTCTTACAAGCGGCATTACACTAGATGGCGTAACAAAGCTTGTTATTGAGCATACCAAAATTGACGGATATACAAACGGCATTTACGGTTTGCGCTCTAAAGATATTGACATTGATAAAAAGTGTGACATATCCGGGCAAACAAGTGACGCGGTGGCTATCATCACTAACTCATCTAACGTATCGGTTGCCCGCTGCATTATTCGTAAAGCTGGTAGACACGCGTTTAATATTTATGACAACGCTTCGCACTATCGCATAAAAGAAAACACAGTAATTGACGTTGCAACGAACGTATTTAACTTAGCAGGCAGCAATACAAAACAAATGCACATTCGAGAAAATACGGTGTTAGATACAACTTTAACAAACATCGTGAACGCGAGCGCCGGAGTTGATAAACTATTCTTTAAAGATAATGTTTACCCTGCTTCAATCGCTACGCCTATTGTATCGTCTGCTACTAATAGTACAGTTCTAGCGGCTGATAATATAACATTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b2e6033c3bece2c309ea80b6bb98864415f2f5170430bf4eaf223b25c6dd3c05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8453
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50