Protein

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Genbank accession
WBK39660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MTAEATARQAADAALQSTLQAADTALGARIDDVLSMVGRNRLLNPGFTRASRGPGGTFSNFTTEFYSVDQWTISGISMSGSWGRNQLNGASNTLAAGRNYFAVNVTSASLASVGQKIESVHTLAGGKATLSVWLRSTVAGKRLGVRIYQSFGTGGSPSAAVSTIITPTPLTLSTTFQKYTLTFDVPSVSGKTLGTNNNDYLYLVFDITNTDSYGGALSGQTAQIEFAFPQLEKGSVATEFEYRSPGVEKALCEYYLKAGVVALRGNGTGSAGAGTFIAHEMRASPAVTFANTIYYYNCSGINYVAYPTGVEVLVNATGTYAFYSTYIMSAEL
Physico‐chemical
properties
protein length:332 AA
molecular weight: 35035,75300 Da
isoelectric point:7,68573
aromaticity:0,10843
hydropathy:0,00813

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
58–235
G3DSA:2.60.120.260 DC_0786
DC_2119
STR
74–197
DC_2119
IPR008979
STR
79–207
IPR008979
WBK39660.1
1 332
Architecture
STR
RBD
STR 58-235 | RBD 237-332
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage L522
[NCBI] 		3003698 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39660.1 [NCBI]
Genbank nucleotide accession
OP948730.1 [NCBI]
CDS location
range 179 -> 1177
strand +
CDS
TTGACGGCTGAGGCCACAGCAAGACAGGCCGCAGACGCGGCACTACAGTCGACACTACAGGCGGCAGACACTGCTCTCGGCGCACGCATTGACGATGTTCTGAGCATGGTTGGCCGTAACAGGCTGCTGAACCCAGGATTTACTAGGGCCTCTCGCGGACCAGGGGGAACCTTTAGTAATTTCACGACTGAATTCTATTCTGTGGATCAGTGGACTATCAGTGGAATCAGCATGTCTGGTAGCTGGGGGCGGAATCAATTAAACGGTGCAAGTAACACCCTGGCAGCAGGCCGAAACTACTTCGCCGTTAATGTGACGTCCGCCAGCCTGGCGTCTGTGGGGCAAAAGATTGAGAGTGTACACACACTTGCTGGTGGCAAGGCCACGCTCAGTGTGTGGCTGCGCTCTACTGTTGCGGGTAAGAGACTTGGTGTGCGCATTTATCAGTCATTCGGTACAGGTGGAAGCCCTTCTGCTGCTGTGTCGACAATCATCACACCAACGCCTCTCACGCTATCAACGACATTCCAAAAGTACACTCTGACCTTCGACGTTCCTTCCGTCTCTGGTAAGACCCTAGGCACGAATAACAACGACTATTTGTACCTGGTGTTTGACATTACAAATACCGATAGCTATGGCGGTGCACTATCTGGTCAGACTGCCCAAATTGAGTTCGCATTCCCGCAGCTTGAAAAGGGATCGGTGGCGACGGAATTTGAGTATCGCTCACCTGGCGTCGAGAAGGCACTTTGTGAGTATTACCTAAAGGCTGGGGTTGTTGCTTTGCGTGGGAACGGGACTGGAAGTGCTGGCGCAGGTACTTTTATTGCACACGAGATGCGTGCATCGCCTGCGGTCACATTTGCGAACACAATCTACTATTACAATTGCTCTGGTATCAACTATGTCGCGTATCCAACTGGCGTGGAGGTGCTGGTCAATGCTACAGGGACTTACGCCTTTTACTCGACGTACATTATGTCGGCGGAGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db38b82d1a33219e7ca664c9e7d71d4c835b34dcf8bd6efde19aad154ff99fec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8953
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50