Protein

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Genbank accession
YP_009286601.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MEKMMASFGDGYTKTQVISENNSIKYKISFAAGSVFSTPSSSYFTFQDSPIGDQQDGAGINVRIFNPALNSVSTKKTFLLTANDADPGNAAFIDYLSSFTQDNTNLLIFTTSGNIKTSTSIENKFKSIYSTMWPNKWITSRYSCTYCGLFSIKNNKMIAENVTYSDGVLRDEDIRPALEFVYDKANDIGATGFSYRALEDFNEYTSSSATIKRYPIDSASGVDISTIGISPGDILFWSFEFLHGENMPPEVPGTNDNKIRIEIRWLNSAGNWIKSVNVDSNHANAGKWIKHEQTVEVPADAGCIVILASKTTPSDTVGTGGVRNMILTETSRAVEPMTSPAAISVNGIRLNSIVSGTDPTLLILPANEFDSSGKPLPGEDISGIIYSSDWREFEK
Physico‐chemical
properties
protein length:395 AA
molecular weight: 43211,76980 Da
isoelectric point:4,84691
aromaticity:0,10127
hydropathy:-0,25949

Domains

Domains [InterPro]
DC_0912
STR
1–395
DC_0912
PS52031
LEC
22–197
PS52031
YP_009286601.1
1 395
Architecture
STR
STR 1-395
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009286601.1
1 395
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,3903
Central domain 51 258 209 0,6195
C-terminal 259 395 136 0,3361
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-258
C-terminal
259-395

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SnwM_CGG4-1
[NCBI] 		1815631 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009286601.1 [NCBI]
Genbank nucleotide accession
NC_031065 [NCBI]
CDS location
range 146495 -> 147682
strand +
CDS
ATGGAAAAAATGATGGCGAGTTTTGGTGACGGATATACCAAAACTCAAGTTATTTCTGAAAATAATTCCATCAAATACAAAATTTCATTTGCTGCGGGGTCGGTATTTTCGACCCCATCTTCTTCATATTTTACCTTCCAGGACAGTCCTATAGGTGACCAGCAAGATGGTGCTGGTATAAATGTTAGAATTTTTAACCCAGCATTGAATAGTGTATCTACAAAGAAAACATTCTTATTAACAGCTAATGACGCTGATCCAGGAAACGCTGCGTTTATTGATTATTTGTCATCGTTTACGCAAGATAACACAAATTTATTAATATTCACAACGTCCGGAAATATTAAAACTAGTACTTCAATAGAGAATAAATTTAAGTCAATTTATTCAACTATGTGGCCTAATAAATGGATAACTTCCCGTTATAGTTGTACATATTGCGGATTGTTTTCTATTAAAAATAACAAAATGATTGCTGAAAACGTAACTTATTCTGATGGTGTTCTTCGCGATGAAGACATAAGGCCTGCACTGGAATTTGTTTACGATAAAGCAAACGATATAGGAGCGACTGGGTTTTCTTATAGAGCGTTAGAAGATTTTAATGAATACACTAGTTCTTCTGCGACGATAAAAAGATATCCAATAGATTCTGCATCGGGTGTAGATATTAGCACTATTGGAATATCTCCTGGTGATATTCTTTTTTGGTCATTTGAGTTTTTACACGGGGAAAATATGCCTCCTGAAGTTCCCGGAACGAATGACAATAAAATAAGAATAGAAATAAGATGGTTGAATTCGGCCGGAAATTGGATTAAATCGGTTAATGTGGATTCTAATCATGCAAATGCCGGGAAGTGGATAAAACACGAGCAGACGGTTGAAGTTCCAGCGGACGCGGGATGTATAGTTATTCTTGCTTCTAAAACTACTCCTAGCGATACTGTTGGAACGGGCGGTGTCCGTAACATGATATTGACTGAGACTTCGAGAGCGGTTGAACCAATGACTTCTCCTGCAGCAATATCAGTCAATGGAATTCGTTTGAATTCTATAGTATCCGGTACTGACCCAACACTGCTTATTTTACCTGCTAATGAATTTGATTCGTCTGGTAAACCATTACCGGGTGAAGACATTTCTGGTATAATTTATAGCTCCGATTGGAGAGAGTTTGAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
13add448263ead40ba69a95b17866b77db38bc684b50f3b17d08a41401b8bbed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6369
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50