Protein

View in Explore
Genbank accession
QPB09932.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MGFNVIPAPEVSGLTGAPGPQGLKGDKGDTGATGPAGPTGATGATGPQGPQGPIGGTGATGPIGPAGLTWKGFWAASTAYVVNDAVSYNGASYRVVVAHTSTTTTPDNDTNRYTVIAAKGATGATGPTGATGPTGATGPQGPKGDPGAVTTVNGKTGDVTLAASDVNAVPTTGGTITPPSGHGLTVYGSTDPATYFRVTDQGHPYSNSLRGTFYNIGVGPTTTEFGGGTYVLGLRNASTVPTTAPTGGVYLWSEGGKLKLKEGSNTYNVGDAMPTTGGKFTGDFSLEGASGSYRQFSFDVGGVKRWTFQKDDVVEDGAGNGGNLRISSRNDDGTFKSTVVYADRGTGQVAIGTTLPTGASKLTVAGSAALKDVSTAPAATSGTAIFYSEAGVGKVRQGDGTIQVIGDKTLTQVQSLGLMARHHMSGGGNIFWDNMNLSWNKRFLVAFGNGRGTGLATGGYFQIDMPPNGTAIPVVGSTSGISTVTVANGRIPLRTIAWGSLWYKLPFGGAPTSVPGNFVITDYTGNQAPFGEDYVLVAQANIDGAGIPSLKLGTGEFLDHWRPLAYKNSWTSYSAGTEGVYPEPQVADGAIPNYRGAGYRMGAGRMVEFKGLIKGGTATSGYDICVMPVGYRPFANHIFYLPNNAAMMRVDIYAAGGYMTVGAPGIGTINNGWVDLSTIRYPAEQ
Physico‐chemical
properties
protein length:685 AA
molecular weight: 69941,97340 Da
isoelectric point:7,70262
aromaticity:0,09197
hydropathy:-0,18467

Domains

Domains [InterPro]
DC_0876
STR
4–235
DC_0876 DC_2308
IPR050149
Unmapped
13–150
IPR050149
IPR008160
STR
13–67
IPR008160 G3DSA:2.10.10.20 G3DSA:1.20.5.320
IPR003610
CBM
74–108
IPR003610
IPR036573
STR
74–104
IPR036573
QPB09932.1
1 685
Architecture
STR
ATT
STR
STR
STR 4-72 | ATT 73-116 | STR 117-235 | STR 261-680 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Sitrop
[NCBI] 		2767587 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB09932.1 [NCBI]
Genbank nucleotide accession
MT701598.1 [NCBI]
CDS location
range 15554 -> 17611
strand +
CDS
ATGGGCTTCAACGTGATCCCTGCCCCCGAGGTCTCTGGCCTCACTGGAGCACCCGGTCCCCAGGGCCTGAAGGGCGACAAGGGTGACACCGGAGCTACCGGGCCTGCCGGTCCGACCGGAGCCACTGGCGCAACAGGCCCGCAGGGTCCACAGGGTCCGATCGGCGGGACCGGAGCCACCGGCCCCATCGGCCCGGCTGGCCTGACCTGGAAGGGCTTCTGGGCCGCGTCCACGGCCTACGTCGTGAACGACGCGGTCAGCTACAACGGTGCGTCCTACCGCGTCGTGGTGGCGCACACGTCCACGACGACCACGCCGGACAACGACACCAACAGGTACACGGTGATCGCCGCGAAGGGCGCTACCGGTGCGACTGGTCCCACTGGAGCCACCGGCCCCACTGGTGCCACTGGCCCGCAGGGTCCGAAGGGTGATCCCGGAGCCGTCACTACCGTCAACGGCAAGACCGGCGACGTGACGCTCGCGGCGAGCGACGTCAACGCCGTGCCGACCACGGGAGGCACCATCACTCCCCCCTCGGGACATGGCCTCACCGTCTACGGCAGCACGGACCCGGCGACCTACTTCCGAGTCACCGACCAGGGCCACCCGTACAGCAACAGCCTGCGCGGCACCTTCTACAACATCGGCGTCGGCCCGACGACCACCGAGTTCGGAGGCGGCACCTACGTGCTCGGGCTCCGCAACGCCTCCACCGTCCCGACCACCGCGCCGACTGGCGGCGTGTACCTGTGGTCCGAGGGTGGCAAGCTGAAGCTGAAGGAAGGCAGCAACACCTACAACGTCGGTGACGCGATGCCGACCACGGGCGGCAAGTTCACTGGCGACTTCAGCCTCGAAGGCGCATCGGGCTCCTACCGGCAGTTCAGCTTCGACGTCGGCGGCGTGAAGCGGTGGACGTTCCAGAAGGACGACGTCGTAGAGGATGGCGCTGGCAACGGCGGCAACCTCCGGATCTCCTCGCGCAACGACGACGGCACCTTCAAGTCGACTGTCGTGTACGCGGACCGAGGGACTGGTCAGGTTGCCATTGGCACCACCCTCCCGACCGGGGCGTCCAAGCTGACGGTCGCTGGCTCGGCTGCGCTGAAGGACGTGAGCACTGCGCCTGCGGCCACCTCCGGGACCGCGATCTTCTACTCCGAGGCTGGAGTCGGCAAGGTCCGGCAAGGGGACGGCACCATCCAGGTCATCGGCGACAAGACGCTCACCCAGGTTCAGAGCCTCGGCCTCATGGCCCGGCATCACATGAGCGGTGGCGGCAACATCTTCTGGGACAACATGAACCTGTCCTGGAACAAGCGGTTCCTCGTCGCCTTCGGTAACGGGCGCGGCACCGGCCTCGCGACAGGCGGCTACTTCCAGATCGACATGCCGCCCAACGGCACGGCGATTCCGGTCGTCGGTAGTACGTCAGGCATCTCGACGGTCACCGTCGCCAACGGTCGCATCCCGCTGCGCACCATCGCCTGGGGCTCCCTCTGGTACAAGCTCCCGTTCGGTGGAGCTCCCACCTCGGTGCCTGGCAACTTCGTGATCACGGACTACACCGGCAACCAGGCCCCGTTCGGCGAGGACTACGTCCTGGTCGCTCAGGCCAACATCGACGGCGCTGGCATCCCTTCGCTGAAGCTGGGGACCGGCGAGTTCCTGGACCACTGGAGGCCGCTGGCCTACAAGAACTCCTGGACTTCGTACTCCGCTGGCACCGAAGGCGTCTACCCCGAGCCCCAGGTCGCAGACGGCGCGATCCCCAACTACCGAGGCGCTGGCTACCGCATGGGCGCTGGCCGCATGGTCGAGTTCAAGGGCCTGATCAAGGGCGGCACTGCCACCAGCGGCTACGACATCTGCGTCATGCCAGTCGGCTACCGCCCCTTCGCCAACCACATCTTCTACCTGCCGAACAACGCGGCCATGATGCGCGTGGACATCTACGCCGCTGGCGGCTACATGACCGTGGGAGCTCCCGGCATCGGCACCATCAACAACGGCTGGGTCGATCTCTCCACGATCCGCTACCCCGCCGAGCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff1f965de84e16b76d8359d16feb8bda929502ce89c43008cc01d409dfa332d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptomyces phage Sitrop Portillo,V.H., Diaz,H., Clark,J.D., Hernandez,I., Liu,M. and Burrowes,B. 2021-01-07 — GenBank