Protein

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Genbank accession

CAM0019201.1 [GenBank]

Protein name

tail collar fiber protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,88

TSP

Evidence RBPdetect2

Probability 0,94

Protein sequence

MRIVKSSTSLRNSRSSNVDQLTRFKVVIQNAYLSISSMKSRRFRVSITQVGVATLSEELLQYIKDQIKNGTLSFTDLIDGPEYAGQDGKFLQAYSGSGSTGMQWQDLPSAGLNWQVEDTDFLAQDKIGILASNGITITLPSDPEEGNLVAIADHNSEFDVTPVTVVGSGGYLIEDESDLVLDLRNAYVQLIFDGTKWEIAQVNHPFNIQEITEETFPSGQISYTLSRIPPSRSSILVTSGGKIIPTSQYSLVGNVLSFGAVASDIIQVRHIGVPKATEVSDTPVGAMLYFPNSEPVDGWLDCNGSSISASVYPDLVKFLTKNPQAEIAYLPDARGNFIRTFDYGNGTDVIAPHSIDNILKDNKWGRWISTTNEATSENLWDGSTATRTTVLVSQGYIGYRFDAPVTMTEMILNNNDAIGTQHLPDTGIVRASHDGITWVDASNTVTLGATSQGRNTTFTVTTNDAYRFWSIHGTGGQPYADGSGEYWGVTSLYMNGSSTNRIVGGFQEQSVGPMPATTLGGTAAGTLAVASGAGANVLGQGGSGQVSGGGETRPDNQSYVLRIKAFHYQSGDLASTDVTALRDEVSRLSGQVNDGTSYVGPDAPENPSENARWYDTTSGRTYIWFNDGDSYQWVDDSPQAASTAQESLNAAEILSIGSTTPRALNERFSDVVNVLDFGAVGDGVTDDTAAIQSAIDASEGLEVLLPCGVYKTTTSIHINKSITLLGDSATIKASPTAYHGITIAANTDAVTIRNLTLKNTTDDSGTTTAYAITAMDDVTNCKYQDCIFDGWTGGLALLIRNDGILIENCTFRNMVFVPGIGSGGYGVLIEAGRNTITQGNTFEETVERHHLYYGVNAADRAVRGYNHTVVNNTFLGDSKPTRATGFEYLVKFMSTDNVTITGNTFNGGVGHVWITQPPGSDSPSGYTITGNAFRNATRGNSTNNYVIGSEGESGSSSTITNVVIDGNSLHNNDCHHAMKFDEAISLLISDNQISGFMPNIESGINIQNSSSDVTIQDNAIRMYNGLGRGIFLNSTGNSTNTNTDINVHGNIIRSAIFGIFFSYCPDIKVLNNHVDNCSDTFIYNFSAMGNDSVIAYNILTGAGSTGINVTGASDQKLRVYENDIQATVTSRAIFAQGGVHLVKPIGNKTSNSTIQNVETWVTNSTLLPPATNWNVGDRVNFLIDTTPYSGAVTDGGSWFLY

Physico‐chemical properties

protein length:	1201 AA
molecular weight:	128774,63820 Da
isoelectric point:	4,65889
aromaticity:	0,08493
hydropathy:	-0,21582

Domains

Domains [InterPro]

IPR006626
Unmapped
111–133

IPR006626 SSF88874 DC_0790 IPR039448 IPR012334

IPR037053
ATT
280–340

IPR037053 IPR012334 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR011083
ATT
285–338

IPR011083 IPR011050

IPR024535
ENZ
672–736

IPR024535 IPR006626 IPR006626 IPR006626 IPR011050

DC_1683
STR
686–1029

DC_1683

IPR039448
ENZ
955–1124

IPR039448

CAM0019201.1

1 1201

Architecture

ATT

STR

ATT 280-340 | STR 341-405 | STR 555-1167 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR006626	Unmapped	-	111	133	InterPro	Parallel beta-helix repeat	-	-	-	-
SSF88874	STR	SSF88874	278	405	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	280	340	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	285	338	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
DC_0790	STR	DC_0790	555	729	Novel HMM	DC_0790	Central	Low	Positional only	40 proteins / 40 hits
IPR012334	STR	IPR012334	653	908	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	669	967	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR024535	ENZ	DC_0410	672	736	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
DC_1683	STR	DC_1683	686	1029	Novel HMM	DC_1683	Central	Low	Positional only	8 proteins / 8 hits
IPR039448	ENZ	DC_0799	740	915	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	747	776	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	801	831	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	895	930	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	953	1167	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	954	976	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	955	1166	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR039448	ENZ	DC_0799	955	1124	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	983	1008	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1010	1034	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1042	1063	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1064	1084	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1089	1111	InterPro	Parallel beta-helix repeat	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CAM0019201.1

1 1201

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	361	361	0,8765
Central domain	362	560	200	0,2844
C-terminal	561	1201	640	0,0763

Note: Constraints were applied during segmentation.
Fixed 72 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-361

Central
362-560

C-terminal
561-1201

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Vibrio phage D181 [NCBI]	3104936	Viruses >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAM0019201.1 [NCBI]

Genbank nucleotide accession

OZ196140 [NCBI]

CDS location

range 31347 -> 34952
strand +

CDS

ATGCGTATAGTAAAGAGCAGTACATCCTTGAGAAATTCTCGGAGTTCAAATGTAGACCAACTGACGAGATTCAAGGTGGTAATACAGAATGCCTATCTCTCAATATCGTCAATGAAATCAAGGAGATTTAGAGTGAGTATAACACAGGTCGGAGTCGCGACACTCAGCGAAGAGTTGCTGCAATACATCAAAGATCAAATCAAGAACGGCACGCTGTCGTTTACAGACCTTATCGACGGACCTGAGTATGCCGGTCAGGACGGTAAGTTCCTACAGGCTTATTCAGGCTCAGGATCTACAGGCATGCAATGGCAAGATCTACCATCTGCAGGCCTTAATTGGCAAGTAGAAGATACAGACTTCCTGGCCCAGGATAAGATCGGTATCTTAGCAAGCAATGGAATTACAATAACACTACCTAGTGATCCTGAAGAAGGTAATCTAGTAGCAATAGCGGACCACAACAGTGAGTTCGACGTAACTCCTGTAACGGTAGTAGGTTCCGGAGGCTATCTGATCGAAGATGAATCAGATTTAGTACTAGACCTACGTAACGCTTACGTACAACTAATCTTCGACGGCACTAAGTGGGAGATCGCACAGGTCAACCACCCTTTCAATATCCAGGAGATTACCGAGGAAACTTTCCCAAGCGGTCAGATTTCATATACGCTCAGCCGTATTCCACCAAGCCGTAGCTCTATCCTAGTGACTAGTGGCGGCAAGATCATCCCTACAAGCCAATACAGCTTGGTAGGTAATGTACTTAGTTTCGGAGCAGTAGCATCTGATATTATTCAAGTACGTCATATCGGCGTACCTAAGGCTACTGAGGTTAGCGATACTCCGGTAGGCGCTATGCTTTATTTCCCTAACAGCGAGCCTGTAGATGGGTGGTTGGATTGTAATGGTTCAAGCATTAGTGCCAGTGTATACCCGGACTTAGTTAAGTTCCTTACTAAGAATCCTCAGGCGGAAATTGCATACCTACCGGACGCACGTGGTAACTTTATCCGTACTTTTGATTATGGTAACGGTACTGACGTTATTGCGCCTCACAGTATCGATAATATACTTAAGGATAATAAGTGGGGTCGCTGGATCTCTACGACTAACGAAGCTACATCAGAGAATCTGTGGGACGGCAGCACTGCTACTCGTACCACTGTATTAGTATCGCAAGGTTACATCGGATACCGTTTCGACGCTCCTGTGACTATGACAGAGATGATCCTGAATAACAATGATGCTATCGGTACACAACACCTTCCAGATACAGGTATCGTACGTGCCTCTCACGACGGTATTACATGGGTAGACGCATCCAATACTGTTACTCTAGGAGCTACGTCTCAAGGTCGTAATACTACCTTCACAGTTACGACTAATGATGCGTATCGCTTCTGGTCTATTCACGGTACAGGTGGTCAGCCGTATGCTGACGGATCTGGCGAGTACTGGGGTGTAACCAGCCTATACATGAACGGTTCGTCAACTAACCGTATCGTAGGCGGGTTCCAGGAGCAGAGCGTAGGTCCTATGCCTGCAACTACTCTAGGCGGGACTGCGGCAGGTACTCTAGCAGTAGCTAGTGGTGCAGGAGCTAACGTACTAGGTCAAGGCGGAAGCGGTCAGGTATCAGGTGGTGGAGAGACTCGCCCAGATAACCAATCGTACGTCCTACGTATCAAGGCGTTCCATTACCAGTCAGGCGACTTGGCATCTACGGACGTTACTGCACTGCGTGACGAAGTATCTCGTCTAAGCGGGCAGGTTAACGATGGTACATCTTACGTAGGTCCAGACGCTCCAGAGAATCCTAGCGAGAATGCTCGTTGGTATGATACGACTTCTGGTCGTACGTACATCTGGTTCAACGATGGCGATAGCTACCAATGGGTAGATGATAGCCCTCAAGCAGCTAGTACAGCTCAAGAGAGTCTTAATGCAGCAGAGATCTTGTCTATCGGATCGACTACCCCTCGCGCTCTTAATGAACGTTTCTCTGACGTAGTAAACGTGTTGGATTTCGGAGCAGTCGGAGACGGCGTAACAGATGATACTGCAGCTATCCAGTCGGCTATTGATGCATCAGAGGGTCTGGAAGTACTCCTCCCCTGTGGTGTATACAAAACAACTACATCTATCCATATTAATAAGAGCATAACTCTACTAGGTGATAGCGCTACGATAAAGGCTTCCCCTACGGCTTATCATGGTATAACTATTGCTGCTAATACAGACGCAGTAACTATTAGAAATCTAACATTAAAGAATACAACTGATGACTCTGGTACTACTACTGCATATGCGATTACTGCTATGGACGATGTTACTAACTGTAAGTATCAAGATTGTATCTTCGATGGGTGGACTGGTGGACTTGCTTTACTAATCCGTAACGATGGCATTCTAATCGAGAACTGCACGTTCCGTAATATGGTATTCGTCCCAGGTATTGGTTCAGGTGGTTATGGCGTATTGATTGAAGCTGGTCGTAATACTATTACTCAAGGTAATACCTTTGAGGAAACAGTAGAGAGACATCATCTTTATTACGGTGTAAATGCCGCTGATCGAGCAGTCCGAGGGTACAATCATACGGTAGTTAATAATACGTTCTTAGGGGATAGTAAACCGACTCGTGCAACCGGCTTTGAATACCTTGTTAAGTTCATGTCAACTGATAATGTAACTATTACAGGTAATACCTTCAATGGCGGTGTCGGTCATGTATGGATTACGCAACCTCCCGGCTCTGATAGTCCAAGTGGATATACTATTACAGGCAACGCATTCCGTAATGCAACTCGTGGTAACAGTACTAATAACTATGTTATTGGTTCAGAAGGTGAGTCAGGCAGTAGTTCGACGATAACTAATGTAGTTATTGACGGAAACTCGCTACATAACAATGATTGTCATCATGCAATGAAGTTTGATGAAGCGATATCTTTGCTAATCTCGGATAATCAGATTTCAGGTTTCATGCCTAACATAGAGTCTGGTATTAATATTCAGAACTCATCTTCTGATGTTACTATTCAAGATAATGCAATCCGAATGTACAATGGGTTAGGTCGCGGTATATTCCTAAATTCAACCGGCAACTCCACGAATACAAATACCGATATCAATGTTCATGGCAACATCATTCGCTCTGCAATCTTCGGTATTTTCTTCTCTTACTGTCCTGATATCAAGGTGTTGAATAACCATGTCGACAACTGTTCTGACACATTCATCTATAACTTCAGTGCTATGGGTAATGATTCGGTTATTGCGTATAATATATTGACAGGAGCAGGCTCGACAGGCATCAATGTTACAGGTGCATCCGACCAGAAACTTCGCGTTTACGAGAATGATATCCAAGCAACCGTTACGTCTAGGGCGATATTTGCCCAAGGTGGAGTGCACTTAGTTAAGCCGATCGGTAATAAAACATCCAACTCTACAATACAGAATGTAGAGACGTGGGTGACTAACTCGACTTTATTACCACCTGCTACTAACTGGAACGTAGGAGATAGGGTTAATTTCCTAATAGATACGACCCCATACAGTGGTGCAGTTACTGATGGCGGTAGTTGGTTCCTATATTAA

Genome Context

Tertiary structure

PDB ID

15944b93fe6d393361d05a3a8b5ea0cc7f0cafc5023edf538a4e8eadb3f8770d

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6841

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence