Protein

View in Explore
Genbank accession
XAO14272.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNNNTYQHVSNESIYVEFDPVGSNFPDTVTNVQAALAAISPSGVNGVPEATTTTPGIIQIATPQEVIDGLDNSKAVTPATLNARLQYPNATETQYGLTRYATEDEAVTGTIDDASITPLKLNQKIDNVFQTKVSTEATNGVIKISTSAAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNSDATESITGVVRLATVAQAQQGTLREGYAISPYTFMNSVASETNKGVVKLGTQTEVNSNNSSVVVTGATLNGRGATTSLRGVVRLTTQAGSQSGGDGSSALAWNADVIHQRGGQTINGTLRINNTLTVGSGGANITGNVNMTGGYIQGNRIVTQNELDRILPVGAITMWAADSLPSSDWRFCHGGTVSASECPVYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGNHLTNPNVNGNDQFGKPRLAVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNEGYEIDPASQRNSKYTMNRPELIGNETRPWNISLNYIIKVK
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55799,02940 Da
isoelectric point:6,40862
aromaticity:0,06072
hydropathy:-0,39981

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
SSF69349
STR
247–327
SSF69349 IPR037053 IPR044916
G3DSA:2.10.280.10
Unmapped
247–287
G3DSA:2.10.280.10 G3DSA:2.160.30.10 SSF88874
IPR015173
STR
247–327
IPR015173 IPR011083 IPR027448
XAO14272.1
1 527
Architecture
STR
ATT
STR
STR 1-330 | ATT 331-401 | STR 402-526 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JM10
[NCBI] 		3128064 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO14272.1 [NCBI]
Genbank nucleotide accession
PP400777 [NCBI]
CDS location
range 150876 -> 152459
strand +
CDS
ATGAGTAATAACAATACATACCAACACGTTTCAAATGAATCTATTTACGTTGAATTCGACCCCGTAGGGTCGAATTTTCCAGATACAGTCACTAATGTCCAAGCCGCATTAGCTGCCATTTCTCCTTCAGGTGTTAATGGCGTACCGGAAGCAACAACTACTACACCTGGAATTATTCAAATAGCTACTCCACAAGAAGTTATTGATGGATTAGATAATAGTAAAGCTGTTACTCCGGCAACACTGAATGCTCGTCTACAATATCCTAATGCAACCGAAACTCAATATGGCTTAACTCGTTATGCTACTGAAGATGAAGCAGTAACCGGAACTATTGACGATGCATCAATTACTCCGCTTAAATTGAATCAAAAAATAGACAATGTATTTCAGACAAAAGTGTCAACAGAAGCAACAAATGGTGTAATTAAAATTTCAACTTCTGCTGCGGCATTAGCTGGTTCTGACGATACAACGGCAATGACCCCGTTAAAAACACAACAATTAGCAATTAAACTTATTTCACAAATTGCTCCAAATAATAGTGACGCCACCGAATCTATTACCGGTGTTGTTCGTTTGGCTACAGTTGCTCAAGCACAACAAGGCACCCTGCGTGAAGGCTATGCAATTTCACCTTATACCTTTATGAATTCAGTAGCATCAGAAACTAATAAAGGTGTCGTTAAACTAGGGACACAGACTGAAGTAAATAGTAACAACTCTTCAGTTGTAGTGACTGGCGCAACATTAAACGGGCGTGGGGCTACAACTTCTTTACGTGGAGTTGTTCGTTTAACTACACAAGCGGGTAGCCAATCAGGTGGTGATGGTTCTTCTGCCCTTGCTTGGAATGCTGATGTTATCCACCAACGAGGTGGACAAACTATTAATGGCACGCTTCGCATTAATAATACGTTGACGGTTGGTTCTGGTGGAGCTAATATAACTGGTAATGTCAATATGACCGGTGGTTATATTCAAGGCAATCGTATTGTGACTCAAAATGAATTAGACCGAATTCTTCCAGTTGGCGCTATTACAATGTGGGCTGCAGATAGTTTACCGAGTTCTGACTGGCGCTTCTGTCACGGTGGGACCGTTTCTGCTTCAGAATGTCCGGTATATGCTTCCAGAATTGGGACACGATATGGTGGTAGCTCTTCTAACCCAGGCTTGCCTGATATGCGTGGATTATTTGTTCGCGGCTCAGGTCGTGGTAACCATTTAACTAACCCTAATGTTAATGGTAATGACCAATTCGGTAAACCTCGTCTGGCGGTAGGTTGTACCGGTGGATATGTTGGTGAAGTGCAAAAACAACAGATGTCATATCATAAGCATGCTGGTGGTTTTGGTGAACATGACGATTCCGGTGCATTTGGTAATACTCGTCGTTCAAACTTTGTTGGTACTCGTAAAGGACTTGACTGGGATAACCGTTCATATTTTACTAACGAAGGATATGAAATTGATCCAGCGTCTCAGCGTAACTCTAAATATACCATGAATCGTCCAGAATTAATTGGAAATGAAACTCGTCCATGGAATATTTCTTTAAACTATATTATTAAGGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d445d5e27431c77da07e8cb70bbf53b77c228135073fa6bb04d11c37cb3d4219
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank