Protein

View in Explore
Genbank accession
XPZ16671.1 [GenBank]
Protein name
N-acetylmuramoyl-L-alanine amidase
RBP type
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGSGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVVASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGPANAYTLTLVPQLQGGLVDGMILRVKFNTVNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRFISEADGSMAFYSRQGSASPTQDILFSRSNVTFLQPRLDVAKNLAYISNSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFNPSTKLTVNAVNQIAGPTGIWNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDEFNIRNHINTMAARPIWGGVEFWGPWNFDPNLKLTLNAFNDSSYTRMTNSGAKDVGIASMTSYADAAMSFFNYEASNPTGPRAAVISFVRNGSRGVLFGLDSDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNRVTNAAAAITFHSPQKYQVNFGLDADDVVKIGGGTMGGVAYPIIHSGNYNDYINQALVQVGLGGVGSYAILAVFDTSAPAESIAPGTIMDSSKLFYSSCDSTYRSSARPTGTWRCMGYVYNRDSTNGDSASLFQRVT
Physico‐chemical
properties
protein length:962 AA
molecular weight: 103603,84920 Da
isoelectric point:5,52887
aromaticity:0,11123
hydropathy:-0,26757

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–686
DC_1788
XPZ16671.1
1 962
Architecture
ATT
STR
RBD
ATT 1-210 | STR 211-686 | RBD 687-962
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ocp-2
[NCBI] 		3388600 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPZ16671.1 [NCBI]
Genbank nucleotide accession
PQ790662 [NCBI]
CDS location
range 24316 -> 27204
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACTTCTTCCACTGGCTTCGCTAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAGATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGGCAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTATGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAGCAACCCGCATGGTCGGTGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCTCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTGTCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCTGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGGGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGGGCATGGACCAACTGGATGTATGCTGTAAACGTCATGGCCCTCCAACAAGGTCGAGTGACCTATGGAGTCGCGGCCGGCCCGGCGAACGCTTACACGTTGACGCTCGTTCCGCAGCTCCAAGGCGGCCTGGTGGACGGCATGATCCTTCGGGTCAAGTTCAACACTGTGAACACCGGCGCCTCTACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACTGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTCTTCGACGCAGCAGGCGACCGCTGGAGGATTCTGGCAGGCGCGCCGCGCATCCAAGTCGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTTAAAGACTATGTCGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTCGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAGGCTGATGGGTCGATGGCATTCTATTCTCGCCAGGGGTCTGCCAGTCCTACCCAGGACATCCTGTTCAGCAGGTCGAATGTAACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCATACATCTCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCAATCCTTCCACCAAGTTGACGGTGAATGCCGTGAACCAAATCGCCGGCCCAACCGGGATTTGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAACAACTCTTATGTCATCACAGATGAATTCAACATCAGAAACCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGGGTGTCGAGTTCTGGGGTCCGTGGAACTTCGATCCGAATCTTAAACTCACTTTGAACGCTTTCAATGATAGCTCATACACCAGGATGACCAACAGCGGCGCGAAAGACGTTGGTATCGCGTCCATGACGAGTTATGCTGATGCGGCCATGTCATTCTTCAACTATGAAGCCTCGAATCCGACCGGGCCGCGCGCGGCCGTTATTTCGTTCGTGAGAAATGGATCGCGTGGAGTGCTATTCGGCTTGGATTCTGACAACAAGCTGAAGTGGGGCGGATATTCCCTAGGGGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGAGTCACAAATGCCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACGACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACGACTACATCAACCAGGCGCTGGTTCAGGTAGGTCTTGGCGGCGTCGGTTCCTACGCGATCCTTGCCGTATTTGACACCTCCGCGCCGGCAGAGTCCATTGCCCCCGGAACGATCATGGACAGTTCCAAGCTGTTCTATTCGTCCTGCGATTCGACCTATCGCAGCAGCGCCCGTCCGACGGGCACCTGGCGCTGCATGGGGTATGTGTATAACCGAGACTCCACCAACGGCGACTCGGCATCCCTATTCCAGCGGGTAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e2ae1765486cc3ae889ce44c52046765b50a369bccdeae4e38c689bc45cff06
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A biofilm-tropic Pseudomonas aeruginosa bacteriophage uses the exopolysaccharide Psl as receptor Walton,B., Abbondante,S., Marshall,M.E., Dobruchowska,J., Alvi,A., Gallagher,L.A., Vallikat,N., Zhang,Z., Wozniak,D.J., Yu,E.W., Boons,G.-J., Pearlman,E. and Rietsch,A. 2025 — GenBank