Protein

View in Explore
Genbank accession
WCS65172.1 [GenBank]
Protein name
lower tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIVDNFSKDDNLIELQTTSQYNPIIDTNISFYESDRGTGVLNFAVTKNNRPLSISSEHVKTSIVLKTDDYNVDRGAYISDELTIVDAINGRLQYVIPNEFLKHSGKVHAQAFFTQNGSNNVVVERQFSFNIENDLVSGFDGITKLVYIKSIQDTIEAVGKDFNQLKQNMADTQTLIAKVNDSATKGIQQIEIKQNEAIQAITATQTSATQAVTAEVDKIVEKEQAIFERVNEVEQQINGADLVKGNSTTNWQKSKLTDDYGKAIESYEQSIDSVLSAVNTSRIIHITNATDAPEKTDIGTLEKPGQDGVDDGSSFDESTYTSSKSGVLVVYVVDNNTARATWYPDDSNDEYTKYKIYGTWYPFYKKNDGNLTKQFVEETSNNALNQAKHYVDDKFGTTSWQQHKMTEANGQSIQVNLNNAQGDLGYLTAGNYYATRVPDLPGSVESYEGYLSVFVKDDTNKLFNFTPYNSKKIYTRSITNGRLEQQWTVPNEHKSTVLFDGGANGVGTTINLTEPYTNYSILLVSGTYPGGVIEGFGLTTLPNAIQLSKANVVDSDGNGGGIYECLLSKTSSTTLRIDNDVYFDLGKTSGSGANANKVTITKIMGWK
Physico‐chemical
properties
protein length:607 AA
molecular weight: 67005,14960 Da
isoelectric point:4,80457
aromaticity:0,09226
hydropathy:-0,49769

Domains

Domains [InterPro]
DC_1215
STR
1–381
DC_1215 DC_0151
G3DSA:2.60.40.3350
ATT
11–138
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
11–159
IPR018913
WCS65172.1
1 607
Architecture
STR
ATT
STR
RBD
STR 1-10 | ATT 11-159 | STR 160-381 | RBD 454-607
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage ASZ22RN
[NCBI] 		3027324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCS65172.1 [NCBI]
Genbank nucleotide accession
ON513432.1 [NCBI]
CDS location
range 16947 -> 18770
strand +
CDS
ATGATAGTAGATAATTTTTCGAAAGACGATAACTTAATCGAGTTACAAACAACATCACAATATAATCCAATTATTGACACAAACATCAGTTTCTATGAATCAGATAGAGGAACTGGTGTTTTAAATTTTGCAGTAACTAAGAATAACAGACCGTTATCTATAAGTTCTGAACATGTTAAAACATCTATCGTGTTAAAAACCGATGATTATAACGTAGATAGAGGCGCTTATATTTCAGACGAATTAACGATAGTAGACGCAATTAATGGGCGTTTGCAGTATGTGATACCGAATGAATTTTTAAAACATTCAGGCAAGGTGCATGCTCAGGCATTCTTTACACAAAACGGGAGTAATAATGTTGTTGTTGAACGTCAATTTAGCTTCAATATTGAAAATGATTTAGTTAGTGGGTTTGATGGTATAACAAAGCTTGTTTATATCAAATCTATTCAAGATACTATCGAAGCAGTCGGTAAAGACTTTAACCAATTAAAGCAAAATATGGCTGATACACAAACGTTAATAGCAAAAGTGAATGATAGTGCGACAAAAGGCATTCAACAAATCGAAATCAAGCAAAACGAAGCTATACAAGCTATTACTGCGACGCAAACTAGTGCAACACAAGCTGTTACAGCTGAAGTCGATAAAATAGTTGAAAAAGAGCAAGCGATTTTTGAACGTGTTAACGAAGTTGAACAACAAATCAATGGCGCTGACCTTGTTAAAGGTAATTCAACAACAAATTGGCAAAAGTCTAAACTTACAGATGATTACGGTAAAGCAATTGAATCGTATGAGCAGTCCATAGATAGCGTTTTAAGCGCAGTTAACACATCTAGGATTATTCATATTACTAATGCAACAGATGCGCCAGAAAAGACGGATATAGGCACGTTAGAGAAGCCTGGACAAGATGGTGTTGATGACGGTTCTTCGTTCGATGAATCAACTTATACATCAAGCAAATCTGGTGTGTTAGTTGTTTATGTTGTTGATAATAATACTGCTCGTGCAACATGGTACCCAGACGATTCAAACGATGAGTACACAAAATACAAAATCTACGGCACATGGTACCCGTTTTATAAAAAGAATGATGGAAACTTAACTAAGCAATTTGTTGAAGAAACGTCTAACAACGCTTTAAATCAAGCTAAGCACTATGTAGATGATAAATTCGGAACAACGAGCTGGCAACAACATAAGATGACAGAGGCGAATGGTCAATCAATTCAAGTTAACTTAAATAATGCGCAAGGCGATTTGGGATATTTAACTGCTGGTAATTACTATGCAACAAGAGTGCCGGATTTACCAGGTAGTGTTGAAAGTTATGAGGGTTATTTATCGGTATTCGTTAAAGACGATACAAACAAGCTATTTAACTTCACGCCTTATAACTCTAAAAAGATTTACACACGATCAATCACAAACGGCAGACTTGAGCAACAGTGGACAGTTCCTAATGAACATAAGTCAACGGTATTGTTCGACGGTGGCGCAAATGGTGTAGGTACAACAATCAATCTAACCGAACCATACACAAACTATTCTATTTTATTAGTAAGTGGAACTTATCCAGGTGGCGTTATTGAGGGATTCGGACTAACCACATTACCTAATGCAATTCAATTAAGTAAAGCGAATGTAGTTGACTCAGACGGTAACGGTGGCGGTATTTATGAGTGTTTACTATCCAAAACAAGTAGCACTACTTTAAGAATCGATAACGATGTGTACTTTGATTTAGGTAAAACATCAGGTTCTGGAGCGAATGCCAACAAAGTTACTATAACTAAAATTATGGGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05631e8b4478ed24ada8ea36e77a1551f11de885f9603c9e3bd4327bceef99c2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7530
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Easy to use experimental pipeline for the analysis and engineering of Staphylococcus aureus clinical isolates Kaluski,L., Stefanczyk,E., Glowacka,A., Szczypkowska,A., Gawor,J., Empel,J., Orczykowska-Kotyna,M., Zuchniewicz,K., Gromadka,R. and Lobocka,M. 2020-10 — GenBank