Protein

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Genbank accession
AUE23388.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTKISVTRALATLSKIEDKITKRINTLETIHVARGEGDRKAIPGSLASVSAFESAAVSDFQGLVDLMKVRDELKAAVVQSNAVTKVTVGGVEMTVAQAIERKRTIVFNEQLLAKLIAQYNHGKILLKKENSDFEMKLEQARAPYISRDKAPDPEQIKTVEAPVRLMGTPSIVDPLNLAVRIRSLEAEIEDFKSNVDFVLSESNARTEVEIEGSI
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23632,91320 Da
isoelectric point:6,21781
aromaticity:0,03721
hydropathy:-0,15442

Domains

Domains [InterPro]
DC_0027
STR
1–213
DC_0027
Coil
Unmapped
182–202
Coil
AUE23388.1
1 215
Architecture
STR
STR 1-213 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage Ro1
[NCBI] 		2053702 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus Ro1 >
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUE23388.1 [NCBI]
Genbank nucleotide accession
MG250486.1 [NCBI]
CDS location
range 80768 -> 81415
strand +
CDS
ATGACTACCAAGATTTCTGTGACTCGTGCTCTGGCAACTCTTTCTAAGATCGAAGACAAGATCACGAAACGCATTAACACCCTGGAAACCATCCACGTTGCTCGCGGTGAAGGTGACCGTAAGGCAATCCCAGGTTCTCTGGCTTCTGTATCTGCTTTCGAAAGCGCAGCGGTTTCTGACTTCCAAGGTCTTGTTGACTTGATGAAAGTTCGTGATGAACTGAAAGCTGCGGTAGTACAGTCCAACGCAGTTACCAAGGTAACTGTCGGTGGTGTTGAGATGACTGTCGCTCAGGCTATCGAGCGCAAGCGTACAATCGTCTTTAATGAGCAACTGCTTGCTAAACTGATTGCTCAGTACAATCATGGCAAGATTCTCCTTAAGAAAGAGAATAGCGATTTTGAGATGAAGCTGGAACAGGCTCGCGCACCTTACATCAGTCGTGATAAGGCACCTGATCCAGAGCAGATCAAGACCGTTGAAGCTCCGGTCCGTCTGATGGGTACTCCGAGCATCGTTGATCCGCTTAATTTGGCAGTTCGCATTCGTTCTCTGGAAGCAGAGATTGAAGACTTTAAGTCTAACGTTGACTTTGTTCTTTCCGAGTCAAATGCACGGACTGAAGTAGAGATTGAAGGATCAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f3b6977cc39bd3210964cad5007b83beaed330ea69d8d1e9f0136fff31b75c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9625
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank