Protein
View in Explore- Genbank accession
- WEU67214.1 [GenBank]
- Protein name
- putative tail fiber protein
- RBP type
-
TSPTF
- Protein sequence
-
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYERNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRTNIPMPAGGPGLSSGGEVITTGRNFNELLNGTWEFFSDAIVVASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVSATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFNPNTKLTLGSFNDSQHTRMVNSAAKDVGIASMTSYADAAMSFFNYEASTPTGNRAAVISFVRNGARGVLFGLDTDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHSGNYNNYINQALVQVGLGGVGSYAILAVFDTSAPAASIAPGTIMDSSKLFYSSCDSTYRSSARPTGTWRCMGYVYNRDSTNGDSASLFQRVT
- Physico‐chemical
properties -
protein length: 962 AA molecular weight: 103458,78600 Da isoelectric point: 6,16762 aromaticity: 0,10811 hydropathy: -0,26674
Domains
Domains [InterPro]
DC_0009
ATT
1–211
ATT
1–211
cd19958
STR
152–231
STR
152–231
DC_1788
STR
167–687
STR
167–687
1
962
Architecture
ATT 1-211 | STR 212-687 | RBD 688-962
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
962
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 400 | 400 | 0,8683 |
| Central domain | 401 | 599 | 200 | 0,2408 |
| C-terminal | 600 | 962 | 362 | 0,8475 |
Note: Constraints were applied during segmentation.
Fixed 65 C-terminal predictions appearing before Central domain
Fixed 65 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-400
1-400
Central
401-599
401-599
C-terminal
600-962
600-962
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pseudomonas phage phiLCL12 [NCBI] |
3029074 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Pseudomonas aeruginosa [NCBI] |
287 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WEU67214.1
[NCBI]
Genbank nucleotide accession
OQ428192
[NCBI]
CDS location
range 31441 -> 34329
strand -
strand -
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGCTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAGATTCAAAACCAACTCTTCTTCATCGCGACCCAGAATGCGCAAGCCTGGCAGCGTCAAATGGCGCCGCCGTGGTTTCAGGGTATGCCCGGTGGGTATGAACGGAACGCCGAAGTCGTGCGCGTCGGCAATGACGGAATCATGCGGCGCTATCGCTCCATGGTGAACGCCAACGCCAGCGATCCTCTCAGCAGTACCACCTGGGAAGAGCAACCCGCCTGGTCAGTTATGCGCACCAACATACCGATGCCGGCTGGCGGCCCCGGTCTGTCTTCGGGCGGCGAAGTCATCACCACCGGCCGCAACTTCAATGAATTGCTGAACGGAACCTGGGAATTTTTCTCTGATGCAATCGTCGTGGCCTCTCAGAACGCTCCGGTGTATCCGGCGTCTGCCGGCGCGGCAGCAGGAATGCTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCCGTGCGCGGGCTCAATGCCGGGGCCTGGACCAACTGGATGTATGCGGTAAACGTCATGGCTCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTCTTCGACGCAGCAGGCGACCGCTGGAGGATTCTGGCAGGCGCGCCGCGCATCCAAGTCGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTCAAAGACTATGTAGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTCGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAGTGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCAATCCTAACACGAAGTTGACGCTTGGCTCATTCAATGACAGCCAGCATACCAGGATGGTCAACAGCGCCGCGAAGGATGTAGGAATTGCGTCCATGACGAGCTATGCGGACGCGGCTATGTCGTTCTTCAACTATGAGGCTTCGACGCCGACCGGGAATCGTGCTGCTGTAATTTCGTTTGTTCGTAACGGGGCACGAGGCGTTCTGTTCGGCCTGGACACGGACAACAAGCTGAAATGGGGCGGCTATTCTCTAGGTGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACAACTACATCAACCAGGCGCTGGTTCAGGTAGGTCTTGGCGGCGTCGGTTCCTACGCGATCCTTGCCGTATTTGACACCTCCGCGCCGGCAGCGTCCATTGCCCCCGGAACGATCATGGACAGTTCCAAGCTGTTCTATTCGTCCTGCGATTCGACCTATCGCAGCAGCGCCCGTCCGACGGGCACCTGGCGCTGCATGGGGTATGTGTATAACCGAGACTCCACCAACGGCGACTCGGCATCCCTATTCCAGCGGGTAACGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
46d6a59c04316ec3fdc78f3e5ea067b45c689d53f8fc1e30efd1c5d73a8bcdc1
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50