Protein

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Genbank accession
WMM35089.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYATSSETSATQSAASAAEAERQAGLSQKSAEASATSAEESKGFRNSAELAAQNAETSRRLAEQAKTAAQQAQTAAETAKTGAETAKAGAEAAATTAGEHAASAKQSELNAKESETNAAGSAVEAGDKAVDATTEANRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKAEADTDVANRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVEIEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGATLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVVKDQIPYITVINGVSPNDNGEVTLGNVVTKNVWDGTSGEVLLRGAFGLGGSGITLNEPDLVSFFKAMRAFGSGYYRNDTAIGGLPAYSAGFYSKTADTHSFICPQYSSGIVFIGTINDNQLDGENPVIHTNVLYGTANKPDLNNDTEGTLSVNKGGTGASTYEGVRSNFNIQGVFCVTSEESGDFNSISSPNSKLNLLIANSKVWGVQDTEGNVVPLLVERGGTGATNISQARKNLGIGESDIPIFKGVNLSLTNGANSGLLYLTNKNTEGVQRTYSSIYNELQSELSKTTIRSSNDVTGKTAFLQFDENGKLYTSSVEATGNIKTGSLNLNYGHTFTINSGEQNALQISNYVAGIDTWCGYTKYNWYNDYAIAGLVRGGSTHVSDYRIEVYSPGVDAYSFQFFPQGKLRGASFNGRCTQGGWEMDLDENAHTIPFNARSIGNNNGGWVPIVSGGYATPSGYRIRAAFGAISPGTSGWGRGVIKLMGDNSYFRGFEFHPSGNLTTWANSPDNAWGTAFEFTKSPSSDRDLKKDIIYTDGKEAYDRVMQWLPTLFKYKGQTTQRYGFIAQDLMKIDPQYVKLVPGAPVFEDVIGINENGEEYVDRRIETGVEDDTLALDSNVMLVDLGAAVIYMNSQMEQQRKELEELKALVATLVNK
Physico‐chemical
properties
protein length:1074 AA
molecular weight: 114737,30300 Da
isoelectric point:4,74642
aromaticity:0,08473
hydropathy:-0,36201

Domains

Domains [InterPro]
DC_0608
ATT
2–553
DC_0608 IPR030392
DC_0195
STR
409–1074
DC_0195
IPR030392
CHP
943–997
IPR030392 Coil
WMM35089.1
1 1074
Architecture
ATT
STR
ATT 2-553 | STR 554-1074
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM35089.1
1 1074
Domain Start End Length (AA) Confidence
N-terminal 1 581 581 0,9230
Central domain 582 780 200 0,3200
C-terminal 781 1074 293 0,8970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-581
Central
582-780
C-terminal
781-1074

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage EH3
[NCBI] 		2986508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM35089.1 [NCBI]
Genbank nucleotide accession
OR413344.1 [NCBI]
CDS location
range 87387 -> 90611
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAATTAACTGCTGCTGTAGAAGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCCGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTATGCTACTTCTTCTGAAACATCTGCAACTCAATCTGCGGCATCTGCCGCGGAAGCTGAGAGACAAGCTGGTCTGTCACAAAAGAGTGCTGAAGCATCCGCTACATCGGCGGAAGAATCTAAAGGATTCAGGAATTCTGCTGAATTAGCTGCTCAAAATGCGGAGACCAGTCGTAGACTTGCCGAACAAGCTAAAACTGCGGCTCAACAAGCTCAGACAGCTGCAGAAACTGCTAAGACTGGTGCTGAAACAGCAAAAGCAGGTGCAGAAGCTGCTGCTACAACTGCTGGAGAACATGCTGCTTCCGCTAAACAATCAGAATTAAATGCTAAAGAATCAGAAACTAATGCGGCTGGTTCTGCTGTAGAAGCAGGAGATAAGGCTGTAGATGCTACTACTGAGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCTCAGATTGTAGATAGCAAGCTGGATAAAGAAGATATATCTGGTTTCATCAAAGTTTATAAGACAAAAGCAGAAGCTGATACAGATGTTGCAAATCGTGTTCTGGGTGAAAAGATTCTAGTCTGGAACCAAACTGATTCAAAATATGGTTGGTATAAGGTTGCTGGTACTGCTGAGGCTCCTGTCCTAGAATTAGTAGAAATTGAACAGAAACTCGTATCAATCAATAACGTTCATGCAGATGATGCTGGTAACGTACAGATCACTCTTCCAGGAGGTAACCCTTCTTTATGGTTAGGTGAAGTTACTTGGTTCCCTTACGATAAAGATTCGGGTGTTGGATACCCTGGTGTTCTGCCAGCTGATGGTCGTGAAGTACTTCGTGTTGACTATCCTGATACTTGGGAAGCTATTGAAGCAGGATTAATTCCTTCTGTATCAGAAGCTGAATGGCAGGCAGGTGCAACTCTTTACTTCTCTACTGGTGATGGTTCTACAACCTTCCGCTTACCCGATATGATGCAAGGTCAGGCTTTCCGTGCACCAACTAAAGGTGAAGAAGACGCCGGAGTAGTTAAGGATCAGATTCCTTATATTACCGTAATCAATGGGGTTTCTCCTAATGATAATGGTGAGGTAACTCTTGGTAATGTTGTTACTAAGAATGTTTGGGATGGCACTTCTGGTGAAGTTCTTCTACGAGGTGCTTTCGGTTTAGGAGGTTCTGGTATTACCCTTAATGAACCTGATTTAGTCTCCTTCTTTAAAGCTATGCGCGCTTTTGGTTCTGGTTACTACAGAAATGATACAGCTATTGGTGGTTTACCTGCATATTCTGCTGGTTTCTACTCTAAAACCGCAGATACACATTCATTCATTTGCCCACAATATTCTAGTGGTATTGTTTTTATAGGTACTATTAATGATAATCAGTTAGATGGAGAAAATCCTGTTATCCATACTAACGTATTATACGGTACTGCTAATAAACCTGATCTTAATAATGACACAGAAGGAACTCTATCAGTCAATAAAGGAGGTACGGGAGCTAGCACGTATGAGGGGGTCCGTAGTAACTTTAATATTCAGGGAGTTTTTTGTGTTACAAGTGAAGAAAGCGGAGATTTTAATTCTATATCATCTCCAAATAGCAAATTAAACTTACTAATAGCAAATAGTAAAGTTTGGGGGGTACAAGATACCGAGGGTAATGTTGTGCCCTTACTTGTAGAAAGAGGTGGTACTGGTGCAACAAATATAAGTCAGGCAAGGAAAAATCTTGGAATTGGTGAAAGTGATATTCCTATATTCAAAGGTGTAAATCTTAGCCTAACTAATGGGGCCAACTCTGGACTTCTATACCTAACAAATAAGAATACAGAAGGTGTGCAACGTACATATTCTAGTATTTATAATGAACTTCAATCTGAGCTAAGTAAGACGACAATACGTAGTAGTAATGATGTAACTGGTAAAACAGCTTTCCTACAATTTGACGAAAATGGTAAATTATACACATCTAGTGTTGAGGCTACTGGAAATATCAAAACAGGAAGTCTAAATTTAAACTATGGCCATACATTTACAATTAATTCTGGTGAGCAAAATGCACTACAAATCTCTAACTACGTTGCTGGAATAGACACCTGGTGTGGATATACTAAGTATAACTGGTATAATGATTACGCTATTGCTGGACTTGTTCGTGGCGGATCCACCCATGTATCTGATTATAGGATTGAGGTTTATAGTCCTGGTGTTGATGCGTATAGTTTTCAATTCTTCCCACAAGGTAAGTTGAGAGGGGCATCTTTTAATGGAAGATGTACTCAAGGAGGATGGGAGATGGATCTAGATGAAAACGCTCATACTATACCTTTTAACGCTAGAAGTATTGGTAATAATAACGGAGGCTGGGTCCCGATTGTATCAGGAGGTTATGCAACTCCATCAGGTTATAGGATTCGTGCGGCATTTGGTGCTATTTCTCCTGGGACTAGTGGATGGGGACGTGGCGTTATAAAACTCATGGGTGATAATAGTTACTTTAGAGGGTTTGAGTTTCATCCTAGTGGTAATTTAACCACATGGGCCAATTCTCCTGATAATGCTTGGGGTACTGCATTTGAGTTTACTAAGTCACCCTCATCAGACCGTGATCTGAAAAAAGATATTATCTACACTGATGGGAAGGAAGCATATGATCGCGTTATGCAATGGTTGCCAACTTTATTTAAGTATAAAGGACAGACAACACAACGCTATGGATTTATAGCTCAGGACTTAATGAAGATTGACCCTCAGTATGTTAAATTAGTTCCTGGGGCACCTGTATTTGAAGATGTAATAGGAATTAATGAAAATGGAGAAGAATATGTCGATCGTAGGATTGAAACTGGTGTTGAAGATGATACTCTAGCGCTAGACAGTAACGTAATGCTTGTTGATTTAGGGGCTGCTGTTATTTATATGAACAGTCAGATGGAACAACAACGAAAAGAGTTGGAAGAGTTAAAGGCTCTAGTAGCTACTCTAGTTAACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cdd37708d0ef6202dfae1ab50d6c449aab6d0aaaf9b2dcaf634d57e9f674f9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Salmonella and Escherichia coli-specific bacteriophages collected from Minnesota Wastewater Treatment Plant Cortes Ortega,E., Hansen,E.G., Farmer,M.L., Martinez-Villalobos,J.M. and Bowden,S.D. 2024-11-27 — GenBank