Protein

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Genbank accession
ANJ20773.1 [GenBank]
Protein name
virion protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MADRRPIVLVDGKFQEFKDGDTLIGAGGGSASYPDFSSNAGKVLAVNDTEDGVEWVIGAGGTENNYFSALYDANVNMSTSMTGATEAMKGALGTVVEDTAVVEMFGYLGSNQDITPMIVKLSDATTSATITEILYTGPEFTTSGSNDINRVAMTSPVHLTAGDVVAFLWVRQDGSSVAISSGSTGYNLPDEITFETVQAIRNNPAGALPAVGEGGVVSSSGTYSVGIRLFSNDLYAAMDFGGGDASYPSFTGNQGKILAVNSAEDGVEWIDAPSGGDTYGAKIGVDILDTPLGSSSGFATKGNLYLASIDMRITDVSFLTATAGASFEVIAAIMDNGTSSNNIVSMTRETVSSYTEGSVANNTVALTTPLEVAAGQYFYVALVRTDGSATTSNGAYYQQNTSITNDSATHQGGQRLQDIDVQVGDGPSSDLFASDMWSVTYSYEPKEADTDSLITQETISGAYSIVEEDLSGLIMKKASAAATVTVTAGLSSSQPVTFIQTGAGQITFVADTGVTIVSADGNLLTRVQGSSATLVQDADTADTYYLFGDLTS
Physico‐chemical
properties
protein length:552 AA
molecular weight: 57149,07800 Da
isoelectric point:4,05003
aromaticity:0,07971
hydropathy:-0,00199

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RD-1410W1-01
[NCBI] 		1815984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Roseobacter denitrificans
[NCBI] 		2434 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANJ20773.1 [NCBI]
Genbank nucleotide accession
KU885989 [NCBI]
CDS location
range 22877 -> 24535
strand +
CDS
ATGGCTGATCGTCGTCCTATCGTCCTCGTAGACGGAAAATTTCAGGAATTCAAAGATGGGGATACCCTTATCGGTGCGGGTGGAGGCAGTGCTTCCTACCCGGATTTTTCTTCCAATGCAGGTAAAGTGCTTGCAGTGAACGACACTGAAGATGGTGTCGAATGGGTCATTGGTGCAGGTGGTACGGAAAACAACTACTTTTCTGCTCTCTATGATGCCAACGTCAACATGAGCACTTCGATGACTGGAGCCACAGAAGCCATGAAAGGTGCTCTAGGTACTGTCGTTGAAGATACTGCCGTCGTTGAGATGTTTGGTTATCTTGGTTCAAACCAAGACATTACTCCCATGATCGTGAAACTGTCTGATGCTACCACGTCAGCAACGATCACCGAGATTCTTTACACTGGGCCTGAGTTCACCACTTCAGGATCCAATGATATCAACCGTGTAGCCATGACATCCCCTGTCCATTTGACAGCCGGTGATGTGGTTGCATTCCTCTGGGTACGTCAGGATGGTAGCTCTGTAGCTATCTCCTCTGGTTCTACAGGGTATAACCTCCCTGATGAGATCACCTTTGAAACTGTCCAAGCCATCCGAAATAACCCTGCAGGTGCTCTCCCTGCTGTTGGTGAAGGTGGGGTTGTATCAAGTTCTGGTACATACTCCGTCGGTATTCGCCTCTTCTCCAATGATCTTTATGCTGCAATGGACTTCGGAGGCGGAGATGCTTCCTACCCCTCATTCACTGGGAACCAAGGAAAGATCCTTGCAGTCAATTCCGCAGAAGACGGTGTTGAATGGATCGATGCACCCTCTGGTGGGGACACCTATGGAGCAAAGATTGGTGTCGATATCCTTGATACCCCTCTCGGATCTTCCTCTGGTTTTGCTACCAAAGGTAACTTGTACCTTGCTTCCATCGACATGCGGATCACAGATGTCTCTTTCCTGACTGCAACTGCAGGAGCTTCTTTTGAGGTGATTGCAGCTATCATGGACAACGGTACTTCGAGCAACAACATCGTCTCGATGACCCGTGAAACTGTGTCTTCGTACACTGAGGGGAGTGTTGCAAACAACACTGTGGCTCTGACCACTCCTCTGGAAGTAGCTGCAGGTCAGTATTTCTATGTTGCTCTGGTCCGTACTGATGGTTCTGCAACCACAAGCAATGGAGCTTACTACCAACAAAACACCTCTATCACGAACGATTCTGCTACTCACCAAGGTGGTCAGCGTCTTCAAGACATTGATGTTCAGGTTGGAGACGGTCCAAGTTCTGACCTCTTTGCGTCTGATATGTGGTCTGTAACCTACTCCTATGAACCAAAGGAAGCCGATACTGACTCTCTGATCACTCAGGAAACGATCTCTGGGGCATACAGTATCGTTGAGGAGGATCTCAGTGGGTTGATCATGAAGAAGGCTTCAGCGGCTGCTACAGTCACTGTCACGGCTGGTCTTTCATCCAGTCAGCCTGTCACTTTCATTCAGACAGGGGCTGGTCAAATCACCTTCGTGGCTGATACCGGTGTGACAATCGTTTCTGCAGATGGAAACCTCCTGACTCGTGTCCAAGGTTCTTCGGCTACATTGGTTCAGGATGCAGATACTGCAGACACCTACTACCTGTTCGGGGATTTGACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
17983f9ecf10f2bde898bcaf3cc6741346dcb24d9e60f37dc2586967297067a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50