Protein

View in Explore
Genbank accession
CAM0042542.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSIKTRSNGIPLRGSGGGGGKIQVYNQSGGEDTELSLAVTKLKWATQDVLGFGATVAPDDPTCIIIGNPPVFLPEISWSAAKKTQVRVSESDISEPDTYLANGFEGQVVDGSLDNFVYNSTLGRGFGTDSRLSVKSYHAGTLVDDTTFTCAANGTQTDGNVTIQVSGYTEDGDGSAFAGQLRVTVNGNGVIGSTNSGMCRVEVSFLEHKFGERRNINQDVFRDKNPSSPIIDGGRYIQVPNDATTHVIKYLSGVGYFDLGSPTIFSMGGIKEHNEDTSKPTDSLVFDSSMFGVTDYTATPFLQPTSFNNYTNLDTQGSFTYSEKPPIDIANMRTIGTTKYTVTIADSWNTSAPYDSNDLRICIDTFNNPSTDTVEYFDLENKRLDSDYNSAWDSTRYCIDGEAIVFNGGLYHGADLPRVIENVEGALGTLGSLANSFPQEGITGSARQNPNYTGHTRDAVFFREFPTPDTTSKANFNVNILTNGDVESQLKSGDLQVYVWKLDSTNPVTVNINTPPAYSPTNQSASTVDSIWLHGNIDYNFGTFEDGAAQTNAGATCRTGVVGSVVNATFGGNDCLEGILIRVQLKRGVVVKELSVTFL
Physico‐chemical
properties
protein length:599 AA
molecular weight: 64496,24980 Da
isoelectric point:4,58881
aromaticity:0,09349
hydropathy:-0,33038

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0042542.1
1 599
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,9400
Central domain 58 256 200 0,0594
C-terminal 257 599 342 0,9574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-256
C-terminal
257-599

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage K406
[NCBI] 		3105686 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0042542.1 [NCBI]
Genbank nucleotide accession
OZ196339.1 [NCBI]
CDS location
range 14333 -> 16132
strand +
CDS
ATGTCAATTAAGACAAGAAGTAATGGAATTCCACTAAGGGGCTCAGGCGGTGGTGGTGGAAAGATTCAAGTATACAACCAATCAGGTGGAGAGGATACTGAACTTAGTCTAGCTGTTACTAAGCTTAAATGGGCAACACAAGATGTACTCGGATTTGGAGCCACGGTAGCTCCTGATGATCCAACATGTATAATCATAGGCAATCCTCCGGTATTCCTCCCAGAAATCTCATGGTCGGCAGCTAAGAAAACTCAAGTTCGAGTATCTGAATCTGACATCAGTGAACCTGACACATATCTAGCTAATGGTTTTGAAGGTCAAGTTGTTGATGGAAGTTTAGATAACTTTGTTTACAATTCTACACTAGGTCGTGGTTTTGGCACCGATTCCCGACTATCAGTTAAATCTTACCACGCTGGAACTTTAGTAGATGATACTACCTTTACTTGTGCAGCCAACGGAACCCAGACAGACGGTAACGTAACAATCCAAGTAAGTGGTTATACAGAAGATGGGGATGGTTCAGCATTTGCAGGTCAACTACGAGTAACCGTAAACGGAAATGGTGTTATTGGTTCTACTAATTCAGGTATGTGTCGAGTGGAAGTGAGCTTCCTTGAGCACAAATTCGGGGAACGTAGAAACATCAACCAAGATGTATTCCGTGATAAGAATCCTAGCTCTCCGATTATTGACGGTGGACGCTACATTCAAGTGCCTAACGATGCTACAACGCACGTAATCAAGTATTTATCTGGTGTCGGATACTTCGATCTAGGTTCCCCTACTATTTTCAGTATGGGCGGAATTAAAGAACACAATGAAGATACTTCTAAACCTACAGATAGTTTAGTCTTTGACTCAAGTATGTTTGGGGTAACTGACTATACCGCTACACCTTTCTTGCAACCAACATCCTTTAACAATTACACAAACTTAGATACTCAAGGTTCGTTTACTTACTCTGAGAAGCCTCCGATTGACATTGCAAATATGCGTACCATCGGCACAACTAAGTATACAGTGACTATTGCTGATAGTTGGAACACATCTGCACCTTATGATTCTAATGATTTACGTATATGTATTGACACTTTCAATAATCCTTCAACAGACACTGTAGAATATTTTGACCTTGAGAATAAAAGGTTAGATTCAGATTATAATAGTGCTTGGGACAGTACACGTTATTGTATTGATGGAGAGGCTATTGTATTTAACGGTGGACTGTATCATGGTGCAGATTTACCTCGTGTTATTGAAAATGTAGAAGGTGCATTAGGGACTTTGGGGAGTTTAGCTAACTCTTTCCCTCAGGAGGGTATTACCGGAAGCGCTCGTCAGAACCCTAATTACACAGGGCATACACGAGATGCTGTATTCTTTAGAGAATTTCCTACACCAGATACAACATCTAAAGCTAACTTTAATGTAAATATTTTAACCAATGGCGATGTTGAATCTCAGCTTAAATCTGGGGATTTGCAAGTTTACGTTTGGAAGCTGGACAGTACAAACCCTGTGACAGTTAATATAAACACCCCACCTGCATATAGTCCAACTAATCAAAGTGCAAGTACTGTGGATAGTATTTGGTTACATGGAAATATTGACTATAACTTTGGTACTTTTGAAGACGGTGCTGCACAAACAAATGCAGGTGCAACTTGCAGGACTGGCGTTGTTGGAAGTGTAGTTAATGCAACCTTCGGGGGGAACGATTGTCTTGAAGGTATCTTGATACGGGTTCAGTTGAAACGTGGAGTTGTGGTTAAAGAATTAAGTGTCACTTTCCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f039f66972d2f0de10da966f3cc610eba416179adb218fdabb8a6ec58e060188
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50