Protein
View in Explore- Genbank accession
- WMM91806.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTSP
- Protein sequence
-
MSIPISDLVQVDIAISPNAIATDGFGPLLFMSKEFVPSVDIYPVRSYTSLKEVLADFPGGEIAKAATTWYSQKPTPKTFLVGAIKNDTMTPATPATVTAASAGVLSTIKLETAATLQLSVSGVQYVTDPINFSSAGDFEEVATLVTTALSSVGAGVTVTQDAGKFKLTTSATGANATISNVGGKVGEVLKLQSSDNAVTVDGKNELSISSDLAAIADAPFNFFYVGLDRKYRGKFTPVDNQMSVAKWCEASSKVFGWGDSDKNILINGTNNSFRRAKNQNLRNTLCVYDASTNGDEYPEISILGRASTVNFNVANSVLTLAYKKGPGVATADLSSGQLSALLSCGGNAFISVAGNVMFYNGRMADGTWFDSVQGVEWLTQKVRLNVFNLFYTSNTKIPWTDTGVAMVNQQVTLALELAKTNGLIAPGYDNEGVFYPEGYKVISTPLELLQSQKGERIWEGTSFIAIGSGAIQGAVISGNFIQ
- Physico‐chemical
properties -
protein length: 482 AA molecular weight: 51078,07190 Da isoelectric point: 4,95280 aromaticity: 0,09129 hydropathy: 0,05685
Domains
Domains [InterPro]
IPR021808
STR
5–428
STR
5–428
1
482
Architecture
STR 5-428 | RBD 429-482
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
482
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 159 | 159 | 0,9271 |
| Central domain | 160 | 358 | 200 | 0,0678 |
| C-terminal | 359 | 482 | 123 | 0,1040 |
Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain
Fixed 8 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-159
1-159
Central
160-358
160-358
C-terminal
359-482
359-482
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage Ecp_YSF [NCBI] |
3072801 | No lineage information |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WMM91806.1
[NCBI]
Genbank nucleotide accession
OR327751
[NCBI]
CDS location
range 18434 -> 19882
strand +
strand +
CDS
ATGTCAATCCCAATTTCTGACTTAGTTCAGGTTGATATCGCAATCTCCCCGAACGCCATTGCGACTGATGGTTTTGGGCCATTGCTCTTCATGAGCAAAGAGTTTGTACCATCTGTTGATATATATCCAGTTCGTTCTTACACCAGTTTGAAAGAAGTTCTGGCAGATTTCCCTGGTGGCGAGATTGCCAAAGCTGCTACCACTTGGTACTCGCAGAAACCGACTCCGAAGACTTTCCTGGTCGGCGCTATCAAGAATGATACAATGACTCCAGCAACTCCTGCCACTGTTACTGCTGCATCTGCTGGTGTACTGTCAACGATTAAGCTGGAAACTGCTGCAACCCTACAGTTGAGTGTTAGTGGTGTTCAGTATGTCACTGACCCGATTAACTTCTCTTCTGCCGGAGATTTTGAAGAAGTTGCAACCCTGGTGACTACTGCACTGTCTTCTGTTGGTGCTGGCGTAACTGTTACTCAAGATGCTGGCAAGTTTAAGCTGACTACCTCTGCAACTGGCGCTAACGCAACTATCAGCAACGTTGGTGGTAAAGTTGGGGAAGTGTTGAAGCTGCAATCTTCCGACAATGCAGTCACTGTTGATGGCAAGAACGAGTTGTCTATTTCCTCCGACCTGGCTGCCATTGCGGATGCTCCATTTAACTTCTTCTATGTGGGCCTTGACCGCAAGTATCGTGGCAAGTTTACTCCGGTAGACAACCAAATGTCTGTGGCGAAGTGGTGCGAAGCATCCAGCAAAGTATTTGGCTGGGGCGACAGCGACAAGAATATTCTTATCAACGGCACTAACAACAGTTTCCGCCGCGCTAAGAACCAGAACCTGCGTAACACTCTGTGTGTTTACGATGCTTCTACAAATGGTGACGAATATCCGGAAATTTCTATTCTGGGTCGTGCATCAACTGTCAACTTTAATGTTGCAAACTCTGTCCTCACTCTGGCATATAAGAAAGGTCCAGGTGTTGCCACTGCTGACTTATCTTCTGGCCAGTTGAGCGCACTACTTTCTTGTGGCGGTAACGCATTCATCTCCGTTGCTGGCAACGTAATGTTCTACAACGGCCGTATGGCTGACGGTACGTGGTTCGACTCCGTACAAGGTGTTGAATGGCTTACCCAGAAAGTTCGACTGAATGTGTTCAACTTGTTCTACACCTCCAATACCAAGATTCCTTGGACAGACACTGGTGTAGCAATGGTTAACCAGCAAGTAACCCTGGCGCTCGAACTCGCTAAGACTAACGGCCTCATTGCCCCTGGCTACGATAACGAAGGCGTCTTCTACCCAGAAGGCTACAAAGTTATCTCCACTCCGTTAGAACTCTTGCAGTCGCAGAAGGGTGAACGTATTTGGGAAGGTACTTCCTTTATTGCTATCGGTTCCGGTGCAATCCAGGGTGCTGTAATCTCTGGCAACTTCATTCAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
cf5784d301a0d6a0412d8f37d28f0e088c47fb1c813df6ed777ee6c1372e815d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50