Protein

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Genbank accession
AFB83825.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSAGTLTLTNDTDAVTGSGTAFTAELAAGDFIVVTVGGIPYTLPVKAVNNNTSLTLVSVYTGPTQSGAAWSAVPRVALNMVTAALVAQSAEALRGLNYDKQNWQQVYSTDGNITVKLPDGTTFTGPSWKYLSDNIVLQNDSRLTTINGKTGGIINGEISLTRSATENISNRIIFTTIVAAEGLTAWAERHNFADGTNRQILNLSSVSGSRKAVLHADGGVLCRAGMNNLSLLRTGYFIDYESGPISLYIDSTRMGEIQLSATSDRLLKKEIEYLSDMVGADPSANALNEVLQWNPATFKYKKRSIIPESDTHLGFIANDLVEVSPECVKGKGLEDGYDENNTAEAYSLDEIAMIAKLTLSIQELQKQISELQANGAGS
Physico‐chemical
properties
protein length:378 AA
molecular weight: 40402,83840 Da
isoelectric point:4,80343
aromaticity:0,06614
hydropathy:-0,10952

Domains

Domains [InterPro]
DC_0162
STR
1–376
DC_0162
IPR030392
CHP
263–375
IPR030392
IPR030392
CHP
263–329
IPR030392 Coil
AFB83825.1
1 378
Architecture
STR
STR 1-376 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPN3UB
[NCBI] 		1147140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFB83825.1 [NCBI]
Genbank nucleotide accession
JQ288021.1 [NCBI]
CDS location
range 25836 -> 26972
strand +
CDS
ATGTCAGCAGGAACCTTAACTCTTACCAATGACACAGATGCTGTTACTGGCAGCGGCACAGCGTTTACAGCAGAACTTGCTGCTGGCGATTTTATTGTCGTAACTGTCGGCGGCATCCCTTATACACTTCCGGTTAAAGCAGTAAATAACAATACATCACTGACGCTGGTTAGTGTTTACACAGGCCCGACACAATCCGGCGCTGCGTGGTCTGCCGTGCCTCGTGTTGCTTTGAACATGGTCACGGCTGCCTTGGTGGCTCAAAGCGCTGAGGCATTGCGAGGACTGAATTACGACAAACAGAACTGGCAGCAGGTTTACAGTACAGACGGAAACATCACAGTGAAGCTGCCAGATGGCACTACCTTCACCGGCCCGTCATGGAAATACCTGTCTGACAATATTGTGTTGCAGAATGATTCTCGTCTGACAACCATAAATGGTAAAACCGGTGGAATTATTAACGGCGAAATTTCCCTCACTCGTTCAGCCACAGAAAATATTTCAAACAGAATCATCTTTACTACCATTGTTGCTGCTGAGGGGTTAACTGCATGGGCTGAGCGTCATAATTTTGCTGATGGCACTAATCGCCAGATACTCAACTTAAGTTCTGTATCAGGTTCGCGTAAAGCGGTACTTCATGCAGATGGTGGGGTCCTCTGCAGAGCGGGTATGAATAACCTTTCGTTGTTACGTACTGGATACTTTATTGATTACGAGTCAGGTCCAATCTCCCTTTATATAGACTCTACCCGTATGGGAGAAATACAGCTATCAGCGACCTCTGACAGGCTTTTGAAGAAAGAAATTGAGTATTTATCAGATATGGTTGGTGCAGATCCTTCTGCCAATGCGCTGAATGAAGTACTCCAATGGAACCCGGCAACATTCAAGTATAAGAAACGCAGCATTATCCCAGAGAGCGATACCCATCTTGGGTTCATTGCTAATGACCTTGTCGAAGTCTCGCCGGAGTGCGTTAAGGGGAAAGGGCTGGAAGATGGCTATGATGAGAACAATACAGCGGAAGCATATTCACTCGATGAGATAGCTATGATAGCTAAGCTGACATTGTCTATTCAGGAATTGCAAAAACAGATTTCCGAACTTCAGGCGAATGGTGCTGGAAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7271dc057eab3ac9a87ff70539977b801cbcf197281c68cf5556beb081f64ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7676
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50