Protein

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Genbank accession
YP_010110360.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGTNTGLGIGIGIPFKNNALGGDKPYFPPELKARMIGVWTNYGKKNTDADRNIIKNKIPNAGGDLEILNAAYKLNSGFGKYSEDFTTWTKNSKITSVDSESFDFVTNVNWNLLYYKSNIGKDIPSFKVHIKLKGEGKVFYNYITSEGVFTNKAITSEEYVVPISYNTKYTGETPVNCGFSIGITSEECSGTITQIPNFEDAFVTDGINDMIISQKTLQEMGVTKELTIVSMIHQISWRDSASVPLTNYIRNGDTFIRNSISNIGKTGIYGYTCFNIKNVNSSASKVINNILGDKNDYIVEYKGDILSERFSVQGHIDGNGNILETSSVAHYWTFAVLGKATEDEINLIIGNYNLDRSLKPDILCNIGKQGITNDNHADFNDKLVDYSGNGRDIQMNNLAWKGGSGIAAKPFETIKDYAIVSDEARQKLTIYNEFSYKIKSNTPSYYWTVQSIIRDNTSYQVTIITDKDCYWINATTFINSEGNKENIRKKYPVLANTPTQVIICGLDQFEYPEGIEPTNAVSYVNLEYAGEITITFIPSHKGGLLLDGVNDFGKVTGMPIYKDYTIIADYERFYLEPITGGRASILSKSSKVGDGSFIFNLEDQDGGKACYTFGGANGNISDDITRIIRYQSKYYNTKTLSIGTAEDNDFMVLGKVREVDSRHFYGVIYSLMTFPYSMSEFLIERQLKKHKLGTLYPDMVEFRPVIKANNDYEIVYTAIIKPDNWQEISIGDYVTVGKSVAIQIKLNLPLEVTNVSSNSLADVSFYKEETGDNVYTIYGRLLDGKSPQKINITIDEYIRFEDIVQPYPSLFTLIDYDTEEVYSWGSKLKVGARFKGNVVNLLPNMYEWQGNVLYNGEVLDWGIKPGVVAKEMVFSWNMPFKYLIDNNEPKVILSPRLLRIPNSSYKILGYIPDISGHGNHGKINNSAYAEGSGVNEDGSYQFDGVDDFVTIPTIVGGKQVLMKVNWDKTIADAILYDQRGYPNEFAIYNADADNNNNPVFAYQARNNGQTYIDGILNKNIKASELRAITHNITITNELSTGTNTSSPVIGSNRVHDAYFTNMALYDFMLFDEISTDDKIKELNEYVGIEGNTE
Physico‐chemical
properties
protein length:1093 AA
molecular weight: 122445,16270 Da
isoelectric point:5,06682
aromaticity:0,11528
hydropathy:-0,33715

Domains

Domains [InterPro]
DC_1124
STR
1–177
DC_1124 DC_1124 IPR013320
YP_010110360.1
1 1093
Architecture
STR
STR
STR 1-177 | STR 246-1082 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010110360.1
1 1093
Domain Start End Length (AA) Confidence
N-terminal 1 35 35 0,9632
Central domain 36 244 210 0,6558
C-terminal 245 1093 848 0,1883
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-35
Central
36-244
C-terminal
245-1093

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr107_1
[NCBI] 		2772061 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010110360.1 [NCBI]
Genbank nucleotide accession
NC_055870 [NCBI]
CDS location
range 31806 -> 35087
strand +
CDS
ATGGGTACTAATACTGGACTTGGTATAGGTATCGGTATTCCTTTTAAAAACAATGCTCTTGGTGGAGATAAGCCTTATTTTCCACCGGAGCTTAAAGCTAGAATGATTGGTGTTTGGACTAATTATGGTAAGAAGAATACTGATGCTGATAGGAATATTATTAAGAATAAGATTCCTAATGCTGGCGGAGATTTAGAGATTCTAAATGCTGCATATAAATTAAATAGTGGATTCGGAAAATATAGTGAAGATTTTACTACTTGGACTAAAAATAGTAAGATAACTTCTGTTGATTCCGAATCTTTTGATTTTGTTACCAATGTTAATTGGAATTTATTATATTATAAATCAAATATTGGAAAAGATATACCTTCTTTTAAAGTTCATATTAAACTTAAAGGAGAAGGCAAAGTATTTTATAATTATATAACTTCGGAAGGAGTATTTACTAATAAGGCTATTACATCAGAAGAATATGTGGTTCCTATTAGTTATAATACTAAATATACTGGTGAAACTCCTGTAAATTGTGGATTTTCTATTGGTATTACATCAGAAGAATGTAGTGGAACTATAACTCAAATTCCAAACTTTGAAGATGCTTTTGTTACCGATGGTATAAACGATATGATTATTAGTCAAAAGACTCTTCAAGAAATGGGAGTTACTAAAGAACTTACTATTGTTAGTATGATTCATCAGATATCTTGGAGAGATTCTGCTTCTGTTCCATTAACTAATTATATTAGAAATGGAGATACTTTTATAAGAAATTCTATTAGTAATATTGGTAAAACTGGAATATATGGTTATACATGTTTTAATATTAAAAATGTTAATTCTAGTGCTTCTAAAGTAATAAATAATATATTAGGAGATAAGAATGACTATATTGTAGAATATAAAGGAGATATATTATCGGAAAGATTTAGTGTACAAGGACATATAGATGGTAATGGTAATATACTTGAAACAAGTAGTGTTGCTCATTATTGGACTTTTGCTGTATTAGGTAAAGCTACCGAAGATGAGATTAATCTTATCATTGGTAACTATAATCTTGACCGTAGTCTTAAACCTGATATATTATGTAATATAGGTAAGCAAGGTATTACTAATGATAATCATGCTGACTTTAATGATAAACTTGTTGATTATAGTGGTAATGGTAGAGATATTCAAATGAATAATCTAGCTTGGAAAGGCGGTAGTGGTATTGCTGCAAAACCTTTTGAAACTATTAAGGATTATGCCATCGTGTCTGATGAAGCTAGACAAAAACTTACTATTTATAATGAGTTTAGTTACAAAATAAAGTCTAATACCCCTAGTTACTATTGGACAGTACAATCTATTATAAGAGATAATACTTCATATCAAGTAACTATTATTACTGACAAAGATTGTTATTGGATTAATGCAACGACTTTTATCAATAGTGAAGGAAATAAAGAAAATATAAGAAAAAAATATCCAGTATTAGCTAATACACCTACACAAGTTATTATATGTGGATTAGACCAATTTGAATATCCCGAAGGTATAGAACCAACTAATGCTGTATCTTATGTTAATTTAGAATATGCAGGAGAAATAACTATTACATTTATTCCTAGTCATAAAGGAGGATTGTTGCTTGACGGAGTAAATGACTTCGGTAAGGTGACAGGAATGCCGATTTACAAGGATTATACTATTATTGCTGATTATGAAAGATTTTATTTAGAACCAATTACAGGAGGTCGAGCATCTATTCTTTCTAAATCTTCTAAAGTTGGAGATGGTTCTTTTATTTTTAATTTAGAAGACCAAGACGGAGGTAAAGCGTGTTATACATTTGGAGGAGCTAATGGTAATATATCCGATGATATAACAAGAATTATTCGTTATCAAAGTAAGTATTATAATACTAAAACATTAAGTATTGGTACAGCAGAAGATAATGATTTTATGGTTCTTGGAAAAGTTCGTGAAGTAGATAGTAGACATTTCTATGGTGTTATCTATTCTCTCATGACTTTCCCATATAGTATGTCCGAGTTCTTGATAGAGCGTCAGTTGAAGAAGCACAAGCTGGGTACGCTGTATCCGGATATGGTGGAGTTTAGACCTGTTATAAAAGCTAATAATGACTATGAAATAGTTTATACTGCTATTATCAAACCTGATAATTGGCAAGAAATATCTATTGGAGATTATGTAACAGTTGGTAAATCAGTAGCTATTCAAATTAAATTAAACCTTCCACTTGAAGTTACGAATGTATCTAGTAATTCTTTAGCTGATGTGTCTTTTTATAAAGAAGAGACTGGTGATAATGTTTATACTATATATGGTCGATTATTGGATGGTAAATCTCCTCAAAAGATAAACATCACAATTGACGAATACATCAGATTCGAAGATATTGTTCAGCCGTATCCATCTTTATTTACTCTTATTGATTATGATACAGAAGAGGTATATAGTTGGGGAAGTAAACTAAAAGTAGGTGCTAGGTTTAAGGGTAACGTAGTTAACTTATTACCTAATATGTACGAATGGCAAGGTAATGTATTATATAATGGAGAAGTATTAGATTGGGGTATTAAGCCCGGAGTTGTTGCCAAAGAGATGGTCTTTAGTTGGAATATGCCATTTAAATATCTAATTGACAACAATGAACCAAAAGTAATCTTATCTCCTAGATTATTAAGAATACCCAATAGTTCATATAAGATTTTAGGTTATATCCCCGATATTAGCGGTCATGGTAACCATGGTAAGATAAACAATTCTGCTTATGCAGAAGGAAGTGGAGTTAATGAAGATGGTTCATACCAATTTGATGGTGTAGACGACTTTGTTACTATTCCTACTATTGTTGGTGGTAAGCAGGTGTTGATGAAGGTGAATTGGGACAAGACAATTGCAGACGCTATCCTATACGACCAAAGAGGTTATCCTAATGAGTTTGCTATCTATAATGCTGATGCGGACAATAATAATAATCCTGTTTTTGCTTATCAGGCAAGAAATAATGGGCAAACATATATTGATGGTATTTTGAATAAAAATATCAAAGCATCTGAATTGAGGGCTATTACTCATAATATAACTATTACAAATGAATTAAGTACAGGGACAAATACATCTTCTCCTGTTATTGGTTCAAATAGAGTACACGATGCTTACTTTACTAATATGGCATTGTACGACTTCATGCTCTTCGATGAAATCTCAACAGACGATAAGATTAAAGAGCTGAATGAGTATGTAGGTATAGAAGGCAATACAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3facaa45863cec0be31a814ff04809a06541ec9059dc95845a0dc0d913a6cd75
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2559
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank