Protein

View in Explore
UniProt accession
A0A8S5V319 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MAWIQTGNIRGPVGPAGQQGEQGPTGPAGPAGQQGERGLPGPAGERGPAGERGPAGQDGKGIEIAGQVPTYTELPTDLTTDDAGKGYLVEADGLLYIWGGDKFPAEGQGAAFQGPAGERGPAGEPGPAGQQGEQGIPGPAGQQGEPGPQGVAGERGSKWFVGEGAPGALQDTKPGDMYLDTTTGVVYQLN
Physico‐chemical
properties
protein length:190 AA
molecular weight: 18882,31820 Da
isoelectric point:4,26784
aromaticity:0,05789
hydropathy:-0,68368

Domains

Domains [InterPro]
PTHR24637
Unmapped
11–167
PTHR24637
IPR008160
STR
11–59
IPR008160 IPR008160
DC_1340
STR
28–185
DC_1340
G3DSA:1.20.5.320
STR
32–89
G3DSA:1.20.5.320
A0A8S5V319
1 190
Architecture
STR
STR 11-185 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct6YY1
[NCBI] 		2825343 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG01121.1 [NCBI]
Genbank nucleotide accession
BK016186 [NCBI]
CDS location
range 35949 -> 36521
strand +
CDS
ATGGCATGGATTCAAACAGGTAATATTCGCGGACCCGTCGGCCCAGCGGGCCAGCAGGGCGAGCAAGGCCCTACAGGCCCCGCAGGACCTGCGGGCCAGCAGGGCGAGCGCGGTTTGCCAGGCCCAGCGGGTGAGCGCGGACCAGCGGGTGAGCGCGGACCAGCAGGCCAGGACGGCAAAGGCATTGAAATTGCCGGCCAAGTCCCCACCTACACAGAACTACCCACCGACCTCACCACCGACGATGCCGGCAAGGGCTACCTCGTGGAGGCAGACGGCCTGCTCTACATTTGGGGCGGCGACAAATTCCCCGCCGAAGGCCAGGGCGCCGCATTCCAAGGCCCCGCAGGTGAGCGCGGACCCGCCGGCGAACCAGGCCCAGCAGGCCAGCAGGGCGAACAGGGAATCCCCGGCCCCGCGGGCCAGCAGGGCGAACCAGGCCCCCAAGGTGTAGCCGGCGAGCGCGGCTCTAAATGGTTCGTAGGCGAAGGCGCCCCAGGTGCCCTACAAGACACCAAACCCGGCGATATGTACCTCGACACCACCACAGGCGTGGTCTACCAACTCAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c8f37fd0ec7befabe2c2875d36c4586ab4f4bfe15593979a077925fbd5a17c0e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50