Protein

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Genbank accession
QQO90855.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSGYEGAYSSILQGVSQQLPKLRLVGQVTAQDNMISDIVTNVRRRPGLAFKFILDMVGEDNTSIKAWETDIAGQRVHVFIGTKTGKLRVVNESLTAVVASVDNAPYMIAGKAQDIRGTTVGDEFYLLNVTQQPTIGAASEINVPPERSGFFYIRAGAFSKQYKVVVQNNQSAQEFNYTTPNGTGAGDAAASTPDAIAAALMASNPGGVTALNLGFVVQGAYVYIQSQSPGTVTFTAVSTPSGSTYIQTSNTSKVRTEADLPALLPPNANGMVMAVGEQRTFRYYKFNATTMEWLESGAYGSAATLLNMPMVLTYKNTGWSFSQPLYEGRFAGDDETNPFPTFLTARKPSGLGSFQNRLVILAGSYVYMSSSTNARRFLRSTVTALVDSDTIAVGSSANSSAEYQYAVPFQKDLLLFSQKYQALIPSSGQAVTPRTATVLLTSAYSVDTLSEPVPVGRTLLFAAPRSADYFGFMEMVSSQYTDAQYVANDATAHIPKYLGGQCRFGVASSVASMVLFAPSRDPRSLVVYEYSWDGDTKVQQAWHTWRFKYPVAAAYFTNEVINIIFIQNGLIVGCTMDPRQGVLSFDSSRRPFLDFNAELDVVDGQCTLPEWTTRFDPAFAETVKLSVSTGPLAGEAVGVAGYNGRVLTTVRSFPNGKVSFGQSYRSLLSPTPPVAQDHNGIKIESSKLTVLRFGVSTQNSSEYNVLITDNTTEDLEALDQSTLRFCSTELELGQARYSVASRAIIPARTDADTTSLALFTESTGELNFTGLDYMGRFNTRIRRR
Physico‐chemical
properties
protein length:784 AA
molecular weight: 85120,73880 Da
isoelectric point:5,84648
aromaticity:0,10332
hydropathy:-0,11301

Domains

Domains [InterPro]
IPR058003
TTP
1–783
IPR058003
DC_0058
STR
1–784
DC_0058
QQO90855.1
1 784
Architecture
STR
STR 1-784
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO90855.1
1 784
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9937
Central domain 144 345 203 0,0650
C-terminal 346 784 438 0,2038
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-345
C-terminal
346-784

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Misse
[NCBI] 		2801386 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO90855.1 [NCBI]
Genbank nucleotide accession
MW286267 [NCBI]
CDS location
range 26199 -> 28553
strand +
CDS
ATGTCCGGCTATGAAGGGGCGTACAGCTCCATCCTGCAAGGCGTTTCACAGCAGTTGCCTAAGCTCCGACTGGTCGGACAGGTGACTGCACAAGACAACATGATCAGCGACATCGTAACGAACGTGCGCCGCCGTCCGGGCCTAGCGTTCAAGTTCATCCTCGACATGGTGGGTGAAGACAACACCAGCATCAAGGCGTGGGAGACAGACATCGCTGGGCAGCGAGTGCATGTGTTCATCGGCACCAAGACCGGCAAGCTCCGGGTGGTGAACGAATCCCTGACGGCTGTAGTAGCATCCGTGGACAATGCGCCGTACATGATTGCCGGTAAGGCGCAGGACATCCGAGGCACTACGGTGGGCGATGAGTTCTACCTGCTGAACGTGACCCAGCAGCCTACCATCGGTGCCGCGTCTGAAATCAACGTACCGCCTGAACGCTCCGGGTTCTTCTACATTCGGGCCGGTGCATTCTCCAAGCAGTACAAGGTAGTCGTCCAGAACAACCAGTCGGCTCAGGAGTTCAACTACACGACTCCAAACGGGACAGGTGCTGGCGATGCGGCTGCATCCACACCGGACGCAATCGCAGCGGCCTTGATGGCATCGAACCCCGGTGGCGTCACAGCCTTGAACCTCGGCTTCGTTGTGCAGGGTGCGTATGTGTACATACAGTCCCAGAGTCCGGGTACTGTGACCTTTACCGCTGTGAGTACGCCAAGCGGTAGCACGTACATCCAAACCAGCAACACCAGCAAGGTGCGGACTGAAGCTGACCTGCCTGCACTGCTCCCGCCTAACGCCAACGGCATGGTGATGGCAGTCGGTGAGCAGCGGACGTTCCGGTACTACAAGTTCAACGCCACAACTATGGAGTGGCTTGAGTCTGGTGCCTACGGATCTGCGGCCACGCTGCTGAACATGCCAATGGTGTTGACGTACAAGAACACTGGGTGGAGCTTCTCGCAGCCCCTGTACGAGGGCCGCTTTGCAGGTGACGATGAAACGAACCCGTTCCCGACGTTCCTGACAGCACGTAAGCCGTCCGGCCTTGGCTCGTTCCAGAACCGGTTGGTCATCCTCGCTGGGTCGTATGTGTACATGAGCAGCAGCACTAACGCTCGACGGTTCCTACGCTCGACGGTGACGGCCCTTGTGGACTCCGACACCATCGCCGTTGGCTCCAGTGCGAACAGCTCTGCTGAGTACCAGTACGCCGTACCATTCCAGAAGGACTTGCTCCTGTTCAGCCAGAAGTACCAAGCGCTGATCCCAAGCTCCGGGCAGGCAGTGACGCCTCGTACAGCGACCGTGCTGCTCACCTCTGCGTACTCCGTGGATACCCTGAGCGAGCCTGTACCTGTAGGCCGTACCCTGCTGTTCGCTGCTCCGCGATCTGCTGACTACTTCGGCTTCATGGAAATGGTGTCGAGCCAGTACACGGACGCTCAGTACGTGGCGAACGATGCGACTGCGCACATTCCGAAGTACCTCGGAGGCCAGTGCCGTTTCGGTGTGGCATCCTCTGTAGCGAGCATGGTCCTGTTCGCACCGTCCCGCGATCCTCGGTCGTTGGTGGTGTACGAGTACAGTTGGGATGGTGACACGAAGGTGCAGCAGGCGTGGCACACTTGGCGCTTCAAGTACCCGGTAGCGGCAGCGTACTTCACGAACGAGGTGATCAACATCATCTTCATCCAGAACGGGCTGATCGTGGGATGCACCATGGACCCACGGCAAGGCGTGCTCAGCTTCGACAGCTCCCGCCGTCCCTTCCTCGACTTCAACGCCGAGCTGGACGTGGTGGACGGGCAATGCACCCTGCCTGAATGGACGACCCGGTTTGACCCGGCGTTCGCAGAGACGGTTAAGCTCAGCGTCAGCACCGGCCCGTTGGCTGGTGAGGCTGTTGGTGTAGCCGGATATAATGGGCGAGTCCTCACGACCGTCCGTTCATTCCCTAACGGCAAGGTAAGCTTCGGGCAGTCTTACCGCTCGCTGCTGTCACCTACACCGCCTGTGGCACAAGACCACAACGGGATCAAGATCGAGTCGTCTAAGCTCACCGTCCTGCGCTTCGGAGTCTCTACCCAGAACTCCAGCGAGTACAACGTGCTGATCACTGACAACACGACCGAGGATCTGGAAGCACTGGATCAGAGCACCTTGCGGTTCTGCTCTACGGAGCTGGAGCTGGGGCAAGCCCGGTACAGCGTAGCATCCCGAGCCATCATCCCGGCAAGGACAGACGCCGACACAACGTCTCTGGCCCTCTTTACGGAGAGTACAGGGGAACTCAACTTCACGGGCCTCGACTATATGGGTCGATTCAACACCCGTATCCGTAGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4e22ec7a3ccd4d990760e59b6778e71502b4d16dea5eaa0e271427cd7db5810
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2979
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Presentation of Three Novel Tailed Phages Targeting Multiple Strains of Pseudomonas syringae Jorgensen,J.B., Djurhuus,A.M., Carstens,A.B., Kot,W., Neve,H., Morris,C.E. and Hansen,L.H. 2020 — GenBank