Protein

View in Explore
Genbank accession
WDS51546.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTLENNNRRFFMKPQFSQPKGSVSKETNKDSIARKFGCKKSEVLYAKPGSTLTGYKVIYDKVTQRSYALPSNLPAGATITSLTDGILVHNTGTVDLGELAVLREEFVTLVENFTSGFTIRVKNEVVSDGTYLYRWGGSLPKIVPPSSTPLNSGGIGVGKWVLSDRTKAELGSSSGAGMSGFDPFYTYPDKTVGNYLSQVPGSDNTGMNNSLDSFNAAILKLALKGGGVLHPEPGIYKISGGSVLLPSYVTLDLRGCELRGDGKGTNTLIASGWVENGTLIDITPEYGTGGGDGNGTHFVIQARVFGGKLTNAGIGIRGQRFNYGTTIEGVWFENSLSQGWFTTHSWGLKVTRCLARATCKMLDFVDWTEVSNNDFEGLAYFVSGYVGLIIGTGGYGGSYSCRIISNGFHQMETAIKLEGEIDDLVIESNHYERTVYHVVGDQYTKTNFRIKHNWMKANLAHPDDPSLEPPTKPGVIPMVFQNLKDSDIGPNRFTNDSGSTYSAHIVATGDECYGNRYYVGYKTDVDNDFSKIQMSNANALYVMRGSNNSTISQPSIELRSGSAAYTVEKYKASYNMQLNKIPLCDVYLDGSGNATVTTWFQQSDQLLGAFSFRFVGSSATAVVAGTFCYDTANVTINKISSGGSLPIAIGAAGDGRLTISFAQVPVGASITGWVKQL
Physico‐chemical
properties
protein length:677 AA
molecular weight: 73080,27210 Da
isoelectric point:6,80325
aromaticity:0,10340
hydropathy:-0,21285

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
12–104
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050 DC_1774
G3DSA:3.30.2020.50
ATT
12–115
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
103–162
IPR040775 IPR011050
WDS51546.1
1 677
Architecture
ATT
STR
RBD
ATT 12-163 | STR 200-510 | RBD 520-677
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS51546.1
1 677
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,9901
Central domain 210 545 337 0,9854
C-terminal 546 677 131 0,9556
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-545
C-terminal
546-677

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeF6a
[NCBI] 		2876785 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS51546.1 [NCBI]
Genbank nucleotide accession
ON809764.1 [NCBI]
CDS location
range 147260 -> 149293
strand +
CDS
GTGACACTTGAGAATAACAACAGGAGATTCTTTATGAAACCGCAGTTTTCACAGCCAAAAGGCTCTGTCTCCAAAGAGACAAACAAGGACTCTATTGCTCGCAAGTTCGGATGCAAGAAGTCCGAGGTTCTGTATGCTAAACCAGGATCCACCCTGACTGGTTATAAGGTGATCTACGATAAGGTCACTCAGCGCTCCTATGCACTGCCTTCTAACCTGCCTGCTGGCGCTACCATCACCAGCCTGACAGACGGCATTCTCGTACACAATACGGGCACCGTAGACCTGGGTGAACTCGCGGTGCTTCGGGAAGAGTTCGTTACTCTGGTTGAGAACTTTACTTCCGGGTTTACGATTCGGGTCAAGAACGAAGTTGTGAGTGATGGGACATACCTGTATCGTTGGGGTGGATCATTACCAAAGATCGTACCTCCTTCTTCTACGCCTTTGAATTCTGGTGGGATCGGAGTTGGTAAGTGGGTTCTTAGTGATAGAACGAAGGCCGAACTTGGAAGTTCTTCTGGAGCCGGGATGAGTGGGTTTGACCCATTCTATACGTACCCTGATAAAACAGTTGGGAATTATTTGTCACAAGTGCCAGGGTCAGATAATACAGGCATGAATAATTCTTTGGATTCGTTTAATGCAGCCATCTTGAAACTCGCTCTTAAAGGTGGGGGTGTCCTTCACCCAGAGCCGGGAATTTACAAAATATCCGGCGGGTCGGTTTTACTCCCATCATATGTTACTTTGGATCTTCGTGGGTGTGAACTTCGTGGCGATGGGAAAGGGACAAACACACTCATAGCTTCTGGGTGGGTCGAAAATGGGACTCTGATAGATATTACGCCAGAATATGGAACCGGCGGCGGTGATGGCAATGGAACTCACTTCGTTATACAAGCCCGCGTGTTTGGTGGCAAGCTGACCAATGCCGGGATAGGCATCCGAGGCCAACGTTTTAACTACGGCACCACCATAGAGGGTGTATGGTTCGAAAATTCGCTTTCTCAGGGTTGGTTTACAACTCATTCATGGGGGTTAAAAGTAACACGTTGTTTGGCTCGCGCGACTTGTAAGATGCTGGACTTTGTTGATTGGACCGAGGTTTCAAACAATGATTTTGAAGGTCTTGCATATTTCGTTTCTGGTTACGTGGGCCTGATCATTGGAACTGGTGGATACGGGGGTAGTTACAGTTGCCGTATTATATCCAATGGGTTCCACCAAATGGAGACAGCCATAAAACTTGAAGGTGAAATAGACGATTTAGTTATTGAAAGTAACCATTATGAACGTACCGTATACCATGTGGTGGGTGATCAATACACGAAGACTAATTTCCGAATCAAACATAACTGGATGAAAGCAAACCTTGCACACCCAGATGACCCGAGTCTGGAACCACCAACCAAACCTGGTGTTATCCCTATGGTTTTCCAGAACCTGAAAGATTCAGACATCGGGCCAAACAGATTTACGAATGATTCCGGCTCTACTTATTCAGCACACATTGTGGCCACTGGTGATGAATGTTACGGTAACCGCTACTATGTTGGTTACAAAACAGATGTTGATAACGATTTTTCAAAAATCCAGATGTCTAATGCAAACGCGTTGTATGTTATGCGTGGTTCTAACAACTCCACGATTTCCCAACCTAGCATTGAATTACGATCTGGTAGTGCGGCATATACTGTAGAGAAGTACAAAGCTAGCTACAACATGCAACTAAACAAGATTCCACTTTGTGATGTTTATCTAGATGGTTCTGGAAACGCGACCGTCACCACTTGGTTCCAACAGAGCGACCAATTACTTGGAGCCTTCAGTTTCAGGTTTGTTGGTAGTTCAGCAACTGCGGTCGTTGCTGGAACATTCTGCTATGATACAGCGAATGTGACTATCAACAAAATATCCTCCGGTGGGTCGTTACCAATCGCTATTGGTGCTGCCGGAGATGGGAGATTAACCATATCTTTTGCACAAGTCCCGGTCGGCGCAAGCATTACAGGTTGGGTTAAACAATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8681a069ace0b9997876e03dfb5b64f4f93a9dcbf8e14b903b08ac15df5ef2ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50