Protein

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Genbank accession
AEC52970.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MFDFPLSPVLNQVYTEGDRSWTWNGKSWVAIVSIGDQGEPGVQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGTQGIAGTQGPQGFQGFQGSSGASGYTYSPTAPSSPNVGDEWTNSDDPRLPTYRYINDGNTTQWVELNASGESGPQGTQGVQGVQGTQGAQGPQGVPGSVMRLCIAASDESTALTTGNNRVRFRMPRAMTVTEVRATVNTAPTGSTLIVDINEGDTPVSILSTKISIDATEFSSVTAAVPPVISDTSLANDALISIDIDQIGATVPGAGLKVWIIGVEA
Physico‐chemical
properties
protein length:376 AA
molecular weight: 37914,57260 Da
isoelectric point:4,18570
aromaticity:0,06383
hydropathy:-0,42553

Domains

Domains [InterPro]
DC_2298
STR
5–87
DC_2298 DC_0656 G3DSA:1.20.5.320
IPR050149
Unmapped
35–255
IPR050149
IPR008160
STR
35–92
IPR008160 IPR008160 DC_2071
DC_2058
STR
70–132
DC_2058
AEC52970.1
1 376
Architecture
STR
RBD
STR 5-279 | RBD 280-376
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEC52970.1 [NCBI]
Genbank nucleotide accession
HQ615693.1 [NCBI]
CDS location
range 28846 -> 29976
strand +
CDS
ATGTTTGATTTTCCACTATCTCCGGTACTCAATCAAGTATACACTGAAGGTGACAGGTCATGGACCTGGAATGGAAAGTCTTGGGTTGCCATAGTAAGTATTGGTGATCAAGGAGAACCTGGAGTACAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGATCCCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGAAATCAAGGAACTCAAGGTATAGCTGGAACTCAAGGCCCTCAAGGTTTTCAAGGTTTTCAAGGTTCTTCAGGTGCATCTGGATATACATATTCACCAACTGCACCATCTAGTCCAAATGTAGGTGATGAGTGGACAAATAGTGATGATCCAAGACTACCTACTTATAGATATATTAATGATGGAAATACTACACAATGGGTCGAACTAAACGCATCTGGAGAATCTGGACCACAAGGAACTCAGGGTGTTCAGGGAGTACAAGGAACTCAAGGAGCACAAGGTCCACAAGGCGTTCCAGGTAGTGTAATGCGTTTGTGTATTGCTGCCTCCGATGAATCCACTGCGCTAACTACGGGAAATAATAGAGTTAGGTTCAGGATGCCAAGAGCTATGACTGTTACGGAAGTTAGAGCAACGGTAAATACTGCACCTACTGGATCTACATTAATTGTAGATATCAATGAAGGAGACACACCAGTATCTATACTAAGTACAAAGATTTCAATCGATGCTACAGAATTTAGTAGTGTTACTGCTGCTGTTCCTCCAGTTATATCAGATACTTCATTAGCTAATGATGCGTTGATATCAATTGATATTGATCAAATTGGTGCTACTGTTCCCGGTGCTGGATTAAAAGTTTGGATAATAGGAGTTGAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e12f657fc0ed4b7e64d66434a798efbfbefff08e40d2762f683d6ce762ef87e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50