Protein

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Genbank accession
XEN39260.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MASHFRLFGRPLSADESMDDMSVTGSLPYYVETDAYEGRLSINNSVGRCRVEVLSSTLPDGAFVRVDNISHEVVIKWDSFEIVAPTMKSVPNGNFELGEDGWALGEGWSIGTGAGYDTYSGTHSARFADVSTKGSDLILKKIPAKVNDYIKATAQVNQGGSSSGNAGARISLIYQDVNNQNLLRLNGNLVTSGKRGAWHQSTVEGGAPAGTRSVLLLVPAYRNKENKPLWVDDIQWNHSYQLGTAAAGDILLSLKVTGSLNRVAYWSGSISVFAKPVWDGSWVEWSYPFTGPDNEYLATFGRTGSGKYIVATQPYIYQSDEPTSGFVSVSGSYDIGAGSTPDNIVTLNNGNSLLLDRVGVWINRAGTSTWTRVASTSATPVFASGLGYSQSRGFAYCMHGTQVHTTIDGDNWTTFVSEGTAATSSYKYTAVEEGNTGNFYLALLTSDLTVLSIHRSTDGLRTWSTVASIPVTGGNYNDRPLVYSASQDSMVVNTPKSVYRLSSSGLGSTLLDSTMLHSVFPDTALLRINHTLEFSSIGELIVGALVDVTSGTGSESRYRVYRIAEDGALSMALDLPDTAITDFTLMPYGDQIALLSTNLVNNPKQAFISTAQ
Physico‐chemical
properties
protein length:612 AA
molecular weight: 65782,37620 Da
isoelectric point:5,14094
aromaticity:0,09641
hydropathy:-0,14673

Domains

Domains [InterPro]
DC_0281
ATT
1–90
DC_0281 G3DSA:2.60.120.260 DC_1356
G3DSA:2.60.120.260
STR
89–236
G3DSA:2.60.120.260
XEN39260.1
1 612
Architecture
ATT
STR
ATT 1-90 | STR 91-612
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN39260.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,4330
Central domain 290 488 200 0,5272
C-terminal 489 612 123 0,3799
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-488
C-terminal
489-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage L13.2
[NCBI] 		3239040 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39260.1 [NCBI]
Genbank nucleotide accession
PQ093899.1 [NCBI]
CDS location
range 31690 -> 33528
strand +
CDS
ATGGCTAGCCATTTTAGGCTTTTCGGACGCCCGCTGTCGGCTGACGAAAGCATGGACGACATGTCTGTTACCGGGAGTCTCCCGTACTACGTGGAAACCGACGCCTACGAAGGCCGCTTGTCCATCAACAACTCCGTTGGCAGATGCAGGGTGGAGGTTCTCTCCTCCACCCTGCCCGATGGGGCGTTCGTCCGGGTGGACAACATCTCACACGAGGTGGTTATCAAGTGGGATTCTTTCGAGATAGTAGCACCAACTATGAAGTCCGTCCCCAACGGCAACTTTGAACTCGGAGAGGACGGGTGGGCACTCGGAGAAGGCTGGTCGATTGGAACAGGGGCAGGCTACGACACGTACTCGGGGACGCACAGCGCGCGCTTTGCAGACGTAAGCACCAAAGGCAGCGACCTGATTCTGAAGAAAATCCCGGCCAAGGTTAACGACTACATCAAGGCGACGGCTCAGGTTAACCAAGGTGGTAGTTCCAGCGGCAACGCCGGGGCCAGGATCAGCCTGATCTACCAGGACGTGAACAACCAAAACTTGCTGCGACTGAATGGTAACCTTGTCACTAGCGGCAAAAGAGGTGCGTGGCACCAGTCCACGGTTGAGGGAGGCGCACCGGCAGGTACTAGGAGTGTTCTTCTGCTGGTCCCGGCCTACCGGAACAAAGAGAACAAGCCCCTGTGGGTTGACGACATTCAGTGGAACCACAGTTACCAGCTGGGAACAGCGGCTGCCGGTGACATTCTCCTGAGCCTCAAGGTCACGGGCTCCTTGAACCGCGTGGCGTACTGGTCCGGAAGCATTTCTGTTTTCGCTAAGCCGGTATGGGACGGGTCTTGGGTGGAGTGGTCGTACCCGTTTACAGGTCCCGACAACGAGTACCTAGCCACGTTTGGTAGAACTGGTTCCGGAAAGTACATTGTGGCTACCCAGCCGTACATCTACCAGTCTGACGAGCCGACCAGCGGGTTCGTGTCGGTGAGTGGCTCGTACGACATCGGCGCAGGGAGTACCCCAGACAACATCGTCACCCTGAACAACGGCAACTCGCTGCTCCTTGATCGGGTCGGCGTCTGGATAAACCGCGCAGGTACTTCCACCTGGACTAGGGTCGCCTCAACCTCCGCCACCCCTGTTTTTGCCAGCGGCCTCGGGTATTCTCAGAGCAGAGGCTTCGCCTACTGCATGCATGGAACACAAGTACACACTACGATCGACGGGGACAACTGGACCACCTTTGTATCCGAGGGAACTGCTGCCACTAGTTCCTACAAATACACGGCGGTAGAGGAAGGGAACACTGGTAATTTCTACTTAGCTCTCCTTACCTCGGATTTGACAGTGCTTTCCATTCACCGGAGCACCGATGGTTTGCGTACTTGGAGCACCGTTGCTAGCATTCCAGTGACTGGAGGAAACTACAACGACCGGCCGCTTGTCTACTCTGCGTCACAGGACAGCATGGTGGTGAACACCCCCAAGTCCGTTTACAGGCTCTCGTCGTCCGGTCTCGGTTCTACGCTGCTCGACTCAACTATGCTGCATTCGGTTTTTCCGGATACGGCCCTGCTTCGCATCAACCACACACTGGAGTTCTCTTCTATCGGGGAACTGATTGTAGGCGCTCTGGTTGACGTTACATCTGGGACGGGTTCCGAGAGCCGGTATCGGGTTTACAGGATCGCAGAGGATGGGGCACTATCAATGGCTCTCGACCTTCCGGACACAGCGATAACGGACTTTACTCTTATGCCCTACGGCGATCAGATCGCGCTTCTATCCACCAACCTAGTCAATAACCCGAAGCAGGCTTTCATCAGCACAGCACAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a620bafb1e0de28a0c716db76231c5f3f9f73998b85c54d30b98229b6d16f88b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50