Protein

View in Explore
Genbank accession
QQO90632.1 [GenBank]
Protein name
putative tail spike associated hydrolase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVITATASDRCASIGALRASEPVFPGQRIDLKEYRQGSGFGGGFFVHDDTDTSTPDDGGYCVVTPKGARWKRALNSLHELNICHFGAEGKGVDTADAFARMMAFSQKNLPGMGVQYPTGTFKLSSFVNTKELGRFRVAGAPIDADFGYFTGTTLYGNNDQEGYIFDIVARRTAISNINFEGAVDINAASNKKVAGKMGFLRNTCPGGQYFRVTNWTSSYVGGITFNILDALDTKFDQFYVSKHTNSFIYGRWSGQTWGVWDHETAIELSNFNIQSCTGPHALDLPRATQSQITNGWIEHTENPGDLSDGHWLIDNFSIEDSGKMLIQNARLTRHHINLQGSSGFDKGTGASNWPGLSGYEKGDLQLEYHGIEVAGSIAAKYFSPIGRMDNNKGSSQWFYLGSVRTTGVGENVKITLQGTRGYNGVNASETRLGGGGSAHGAGIISIKTVSSNYADVQWDGEGSCPVKNVKFTKPFKNTCHVFVELFDWTRYVSPKVEVTSKSRFEAGVPFDFTFVGTTITLEEMQAMADAQTVAAGNTVTLNDAVTGMYLGAKNGIGWNGNGELLLRFALTNGYLPVKITDPVTERVTQGYIKVESSIPSN
Physico‐chemical
properties
protein length:601 AA
molecular weight: 65293,11710 Da
isoelectric point:6,13647
aromaticity:0,10982
hydropathy:-0,30333

Domains

Domains [InterPro]
DC_0717
ATT
3–105
DC_0717 DC_0716
IPR059934
RBD
10–73
IPR059934
QQO90632.1
1 601
Architecture
ATT
STR
ATT 3-105 | STR 106-600 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO90632.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 93 93 0,9835
Central domain 94 375 283 0,9760
C-terminal 376 601 225 0,9311
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-93
Central
94-375
C-terminal
376-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_43
[NCBI] 		2801535 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO90632.1 [NCBI]
Genbank nucleotide accession
MW384823 [NCBI]
CDS location
range 115958 -> 117763
strand +
CDS
ATGGTTATCACCGCTACTGCATCTGACCGTTGTGCATCAATTGGCGCATTGCGCGCGAGCGAGCCGGTATTTCCCGGACAACGTATCGATTTGAAAGAATACCGTCAAGGCTCTGGCTTTGGTGGTGGTTTCTTTGTTCACGACGACACCGACACGTCTACACCTGACGATGGCGGATATTGTGTTGTCACCCCCAAAGGTGCCCGCTGGAAACGTGCACTGAACTCCCTGCATGAGCTGAACATTTGTCACTTCGGCGCAGAAGGGAAAGGAGTCGATACCGCAGACGCGTTCGCGCGAATGATGGCCTTCTCCCAAAAGAACCTTCCGGGTATGGGCGTGCAGTATCCTACCGGTACCTTTAAACTGTCGAGCTTTGTTAACACAAAAGAACTGGGCCGTTTCCGCGTTGCCGGTGCACCGATTGATGCCGACTTCGGTTACTTCACGGGCACCACGCTCTACGGGAACAACGACCAAGAAGGCTATATCTTCGATATCGTTGCACGCCGTACTGCCATTTCGAATATCAACTTCGAAGGTGCAGTAGACATCAATGCGGCGAGTAACAAGAAGGTCGCTGGTAAAATGGGCTTCCTGCGCAACACCTGTCCGGGCGGTCAGTATTTCCGCGTGACTAACTGGACCAGCTCGTACGTGGGCGGTATCACCTTTAACATCCTCGATGCGCTGGACACCAAGTTCGACCAGTTCTACGTGTCTAAACACACCAACAGCTTCATCTACGGTCGTTGGTCTGGCCAGACGTGGGGCGTGTGGGATCATGAAACCGCCATTGAGCTGAGCAACTTCAACATTCAAAGTTGCACCGGCCCACATGCACTTGACCTGCCGCGTGCGACCCAGTCGCAAATTACCAACGGTTGGATTGAGCACACCGAGAACCCAGGCGACCTGTCTGACGGCCACTGGCTGATTGACAACTTCTCGATTGAAGACTCGGGCAAAATGCTGATTCAAAACGCTCGCCTGACACGTCACCACATTAACCTGCAAGGGTCAAGTGGTTTCGATAAGGGCACGGGCGCATCGAATTGGCCGGGTCTGTCCGGTTACGAGAAAGGTGACCTGCAACTCGAGTACCACGGTATTGAAGTGGCGGGTTCTATCGCCGCGAAATACTTCTCACCAATCGGCCGCATGGACAACAACAAAGGTTCCTCACAGTGGTTCTATCTGGGCAGCGTCCGCACTACCGGTGTGGGTGAGAACGTCAAGATTACCCTGCAAGGCACCCGCGGTTATAACGGTGTGAACGCCAGCGAAACCCGTCTGGGTGGCGGTGGTAGTGCGCATGGTGCGGGTATCATCAGCATCAAAACCGTATCGTCTAACTACGCCGATGTGCAGTGGGATGGTGAAGGTTCTTGTCCGGTGAAGAACGTGAAGTTCACGAAACCGTTCAAAAACACCTGTCATGTCTTCGTTGAGCTGTTTGACTGGACGCGTTATGTCTCGCCGAAAGTTGAGGTGACTTCGAAGTCCCGCTTTGAAGCCGGTGTTCCATTCGACTTCACCTTCGTGGGTACAACAATCACGCTTGAAGAAATGCAAGCGATGGCGGATGCGCAGACTGTGGCAGCGGGTAACACCGTGACACTGAACGACGCGGTTACGGGGATGTATCTGGGTGCCAAAAACGGTATCGGTTGGAACGGCAATGGCGAACTGCTGTTACGTTTCGCCCTGACCAATGGCTACCTGCCGGTGAAGATTACTGACCCGGTCACTGAGCGTGTAACCCAAGGTTACATCAAGGTGGAAAGCAGCATTCCGAGTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b8d95a673a131c86cc2ba3519642bb6f381b66d1b0cf2a2718b8fafbb5f01f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_43 Kim,S.G., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank