Protein

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Genbank accession
AYP68730.1 [GenBank]
Protein name
collagen triple helix repeat containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MMSNKVLIGNFKGPEGERGPIGPEGPRGLQGPKGDTGPIGLTGPEGPEGATGPAGPTGAQGPKGDTGERGPAGPTGPKGDKGDTGSQGPKGDTGSTGPQGPKGDTGSTGPQGPTGPKGDTGERGPIGPTGATGPKGDTGNTGPQGPQGATGPRGNSLEFNWSSYSLGIRQEGTTTYQYTNLRGATGPQGPQGPTGATGPTGPKGDKGDTGNTGATGPQGPTGPKGDTGATGPRGPEGPRGPEGPMPEGAYINDTGGGTLNSGVTLLSGGIRSNATNFYIGQSGEARVTDQAGFNSGGTITYKPIRASSFHAEDSDSFVFEQQFGRMKMSPQGQLRIWDYNNNEVLAIRSDIGDNNERSLRMVGLQQYTTSASANLHITGAWHVVRSTSARKYKKDIEPIDLHRAETFFEKAEPVWYRSKCPADDSTYGYYGYIADQVDEFEPRLVMRREEDGEIEGFEYNRVGPMLHTVMKSRFKQYEERISKLERMINDGKETD
Physico‐chemical
properties
protein length:495 AA
molecular weight: 51716,89680 Da
isoelectric point:5,53768
aromaticity:0,06667
hydropathy:-0,94162

Domains

Domains [InterPro]
DC_1431
STR
7–89
DC_1431 DC_1266 IPR008160 IPR030392
IPR050149
Unmapped
12–245
IPR050149 Coil
IPR008160
STR
13–68
IPR008160 IPR008160 DC_1341
AYP68730.1
1 495
Architecture
STR
STR
CHP
STR 7-89 | STR 92-467 | CHP 468-488 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BpsS-36
[NCBI] 		2419622 Uroviricota > Caudoviricetes > Ehrlichviridae > Nairobivirus nv36 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP68730.1 [NCBI]
Genbank nucleotide accession
MH884513 [NCBI]
CDS location
range 21124 -> 22611
strand +
CDS
ATGATGAGCAATAAGGTGCTAATTGGTAACTTTAAAGGTCCAGAAGGAGAGAGAGGTCCAATAGGTCCAGAAGGTCCTAGAGGATTGCAAGGACCAAAAGGAGATACTGGTCCAATAGGGTTAACTGGTCCAGAAGGTCCAGAGGGTGCAACTGGTCCAGCTGGTCCTACTGGAGCTCAAGGTCCAAAGGGTGACACTGGAGAGCGTGGTCCAGCTGGTCCTACTGGTCCAAAAGGTGATAAAGGAGATACTGGCTCACAAGGTCCAAAAGGTGACACTGGAAGCACTGGTCCTCAAGGTCCAAAGGGTGATACTGGTAGCACTGGTCCTCAAGGTCCTACTGGTCCAAAAGGTGATACTGGGGAGCGTGGTCCAATAGGTCCAACTGGAGCAACTGGTCCAAAAGGTGATACTGGTAATACTGGACCTCAAGGACCTCAAGGAGCTACTGGTCCAAGAGGTAACTCTCTTGAGTTTAACTGGAGCTCTTATTCTCTTGGGATAAGACAAGAAGGTACTACCACTTACCAGTACACTAACTTAAGAGGTGCAACTGGTCCACAAGGTCCTCAAGGTCCTACTGGAGCAACTGGACCGACTGGACCAAAGGGAGATAAAGGAGATACTGGTAATACTGGAGCTACTGGTCCTCAAGGTCCAACTGGACCAAAGGGAGACACTGGAGCAACTGGTCCAAGAGGTCCAGAAGGTCCTAGAGGTCCAGAAGGTCCAATGCCAGAGGGAGCTTATATTAATGACACTGGAGGAGGTACGCTTAATAGTGGTGTAACCCTTCTTTCTGGTGGTATTCGCTCTAATGCTACTAACTTCTATATTGGTCAAAGTGGTGAAGCTCGTGTGACTGACCAAGCTGGCTTTAACTCTGGTGGTACGATAACTTACAAGCCAATAAGAGCCAGCTCCTTCCATGCTGAGGACTCTGACTCCTTTGTATTTGAGCAACAGTTTGGAAGAATGAAGATGAGTCCACAAGGACAGCTAAGAATATGGGATTATAACAATAATGAGGTCCTTGCTATTCGCTCAGATATTGGAGACAACAATGAGAGAAGCTTAAGGATGGTAGGGTTACAACAGTACACCACCTCAGCAAGTGCTAACTTGCATATTACTGGAGCTTGGCACGTTGTAAGAAGTACCTCAGCAAGAAAGTACAAGAAAGATATTGAGCCAATAGATTTACACAGAGCTGAGACCTTCTTTGAGAAAGCTGAGCCAGTCTGGTACAGAAGTAAGTGTCCAGCTGATGACTCCACTTATGGCTATTATGGTTATATTGCTGACCAAGTTGATGAGTTTGAGCCACGCTTGGTAATGAGAAGAGAAGAAGATGGAGAGATTGAAGGCTTTGAGTATAATAGAGTTGGTCCAATGCTTCATACTGTAATGAAAAGTAGATTTAAGCAATATGAGGAGCGTATTTCTAAACTTGAAAGGATGATAAATGATGGTAAAGAGACAGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
25196aee3160a1312a5cd646fc6012ebc2d7444599583afddaa66aaaaeebdb26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative Genomic Analysis of Eight Novel Haloalkaliphilic Bacteriophages from Lake Elmenteita, Kenya Akhwale,J.K. — — GenBank