Protein

View in Explore
Genbank accession
QMP18908.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTGKLNLPQTSAFGVNTDNALGGNSITLGDNDTGIKQGGDGVLLFYLNGQLIFGLQPTSADFYKRVAYIHQGVAPDGSGAFADQLNNATAPFVQTQFAWNPTPGGHYVPIAKGLSIRNGQGYPGAVSFGYLLTEQMGFPIPCIHMRGDYGADALWQFNPNDKSFISPGALVAGGIRYNTDGNIFGGCWGSNLADYLNSTYVRDIRLGSAESISAWRGPGYWDTSGYVLTSAGNSNTDEFIDTLTRRPIQKLIGGTYYNVVSI
Physico‐chemical
properties
protein length:262 AA
molecular weight: 28005,85130 Da
isoelectric point:5,22216
aromaticity:0,12214
hydropathy:-0,17252

Domains

Domains [InterPro]
DC_1942
ATT
1–60
DC_1942 G3DSA:6.20.70.20 DC_2105
QMP18908.1
1 262
Architecture
ATT
RBD
ATT 1-60 | RBD 170-262
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YpM_Tongde
[NCBI] 		2749429 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia pestis
[NCBI] 		632 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP18908.1 [NCBI]
Genbank nucleotide accession
MT591577.1 [NCBI]
CDS location
range 2252 -> 3040
strand +
CDS
ATGACCGGAAAACTGAATCTACCACAGACATCTGCATTCGGCGTTAATACCGATAATGCACTGGGTGGTAATTCCATTACTCTCGGAGATAACGACACCGGTATTAAACAGGGCGGCGATGGTGTCCTTTTATTCTATTTAAATGGACAACTGATATTTGGGCTTCAACCCACATCCGCTGATTTTTATAAGCGAGTTGCCTACATTCATCAGGGAGTAGCTCCAGATGGGAGTGGCGCATTTGCAGACCAGTTAAATAATGCCACCGCGCCTTTTGTTCAGACGCAGTTTGCCTGGAATCCCACTCCTGGCGGTCATTACGTACCGATAGCTAAGGGCTTGTCCATTCGCAATGGACAGGGGTATCCAGGTGCGGTCAGCTTTGGTTATTTACTAACTGAACAAATGGGATTTCCCATACCATGCATTCATATGCGTGGAGATTACGGAGCTGATGCTTTGTGGCAGTTTAACCCGAACGATAAATCTTTTATTTCACCGGGTGCTCTTGTTGCGGGTGGCATCCGTTATAACACCGATGGAAATATATTTGGCGGGTGTTGGGGTTCAAATTTAGCTGATTATCTCAATAGCACATATGTAAGAGACATTCGACTTGGTAGCGCAGAATCAATATCAGCATGGCGAGGCCCTGGTTATTGGGATACTTCTGGATATGTTCTGACCTCAGCCGGAAACAGCAACACCGATGAGTTTATTGATACATTAACCAGAAGACCTATTCAGAAGTTGATTGGTGGGACATATTATAACGTTGTGAGTATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e4bac435e8958f4ad51d85cc8b459a8c86bd9461e576e3dad8d3523124861b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of vB_YpM_Tongde, isolated from Yersinia pestis Zhao,X. 2010-10-13 — GenBank