Protein

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Genbank accession
QAX96250.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MSSPDTIVISTKSDFDEVNTDIGDAAAGLVKRVNDLELSGGNKPYEKLTSSLDLNSLQEDGGYFATAVTNGPPMTAFENTHYPNFMIEVSSTASSGARIMKKKLYWISVNGFQVIWQRTYSVAADDTVTADDDWEEIIQSQYSGLPRGKEYELDKMESGGIITFTTSDNLERTGWLLRNFSSAITANSVPALSIRVRYRYNSDNQRQYKLELVTVADWLVASASLSIGEATSTGSGSHTEFCDESSSIVRNNNEMVLFDWMDSRRAVHGTIMVVNNIISVPTSVTLELTTYIIDTNRVALHVREVSADQAELSYLP
Physico‐chemical
properties
protein length:316 AA
molecular weight: 34924,42850 Da
isoelectric point:4,60222
aromaticity:0,08544
hydropathy:-0,26329

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAX96250.1
1 316
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,7162
Central domain 131 305 176 0,0059
C-terminal 306 316 10 0,9939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-305
C-terminal
306-316

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-Yong XC31
[NCBI] 		2500766 No lineage information
Host Vibrio mediterranei
[NCBI] 		689 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX96250.1 [NCBI]
Genbank nucleotide accession
MK308674 [NCBI]
CDS location
range 245423 -> 246373
strand +
CDS
ATGTCTAGTCCAGATACAATCGTCATAAGTACCAAGTCTGACTTTGATGAGGTAAATACCGACATAGGTGATGCGGCAGCCGGATTAGTTAAAAGAGTCAACGACTTAGAGCTTTCTGGTGGCAATAAGCCTTATGAGAAACTTACATCGAGTTTAGATTTAAACTCGCTACAGGAAGACGGCGGATATTTTGCTACGGCCGTGACGAACGGTCCTCCGATGACAGCATTTGAAAACACGCACTATCCAAACTTTATGATTGAAGTGTCGTCTACCGCATCAAGCGGTGCGCGCATCATGAAAAAGAAACTCTATTGGATATCTGTTAACGGTTTTCAGGTTATATGGCAAAGAACTTATTCAGTGGCAGCAGATGACACCGTTACGGCGGACGATGACTGGGAAGAAATAATACAGTCTCAATATTCTGGTTTACCGCGCGGAAAAGAATATGAGCTCGATAAGATGGAAAGTGGTGGCATCATAACTTTCACTACCAGCGATAACTTAGAAAGAACCGGATGGCTCTTAAGGAACTTTAGTTCAGCCATTACCGCTAACAGCGTACCTGCCTTAAGTATCCGAGTTAGATATCGTTATAACTCCGATAACCAGAGACAATATAAACTGGAACTGGTTACAGTGGCCGATTGGCTGGTTGCCTCAGCGTCTCTTTCTATAGGAGAAGCTACATCAACGGGTTCCGGCTCACATACCGAATTCTGCGATGAGTCATCTAGCATTGTACGTAACAACAATGAAATGGTTCTTTTCGACTGGATGGATTCACGTCGTGCAGTACACGGGACCATTATGGTTGTTAACAACATCATTTCTGTTCCTACATCTGTGACGTTAGAACTCACTACATACATTATCGACACCAACCGGGTGGCGTTACATGTTCGTGAAGTTTCAGCAGACCAAGCCGAACTAAGTTACCTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c9d8b142b92ee188554d5c0b869daeff3598bc49549bd2a9f813cbcef01a004
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4819
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50